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Chmp4b charged multivesicular body protein 4B [ Octodon degus (degu) ]

Gene ID: 101559667, updated on 8-Mar-2024

Summary

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Gene symbol
Chmp4b
Gene description
charged multivesicular body protein 4B
See related
Ensembl:ENSODEG00000012366
Gene type
protein coding
RefSeq status
MODEL
Organism
Octodon degus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Octodontidae; Octodon
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
102 current OctDeg1.0 (GCF_000260255.1) Unplaced Scaffold NW_004524613.1 (4303771..4353963)

NW_004524613.1Genomic Context describing neighboring genes Neighboring gene peroxisomal membrane protein 4 Neighboring gene zinc finger protein 341 Neighboring gene tubulin-specific chaperone A-like Neighboring gene small nucleolar RNA SNORA44

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004524613 Unplaced Scaffold Reference OctDeg1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in late endosome to vacuole transport via multivesicular body sorting pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle budding from membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of ESCRT III complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasmic side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in multivesicular body IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
charged multivesicular body protein 4b

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Octodon degus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OctDeg1.0 Primary Assembly

Genomic

  1. NW_004524613.1 Reference OctDeg1.0 Primary Assembly

    Range
    4303771..4353963
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004630825.2 → XP_004630882.1  charged multivesicular body protein 4b

    UniProtKB/TrEMBL
    A0A6P3ESX9
    Related
    ENSODEP00000016789.1, ENSODET00000017001.1
    Conserved Domains (1) summary
    pfam03357
    Location:24 → 198
    Snf7; Snf7
Nucleotide Protein
Heading Accession and Version

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