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DDB2 damage specific DNA binding protein 2 [ Sorex araneus (European shrew) ]

Gene ID: 101555848, updated on 8-Mar-2024

Summary

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Gene symbol
DDB2
Gene description
damage specific DNA binding protein 2
See related
EnsemblRapid:ENSSARG00000002337
Gene type
protein coding
RefSeq status
MODEL
Organism
Sorex araneus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Eulipotyphla; Soricidae; Soricinae; Sorex
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 6
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_04 current mSorAra2.pri (GCF_027595985.1) 6 NC_073307.1 (148252018..148276652)
101 previous assembly SorAra2.0 (GCF_000181275.1) Unplaced Scaffold NW_004545987.1 (3020798..3040338)

Chromosome 6 - NC_073307.1Genomic Context describing neighboring genes Neighboring gene ADP ribosylation factor GTPase activating protein 2 Neighboring gene protein kinase C and casein kinase substrate in neurons 3 Neighboring gene acid phosphatase 2, lysosomal Neighboring gene nuclear receptor subfamily 1 group H member 3 Neighboring gene MAP kinase activating death domain

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables damaged DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to UV IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Cul4-RING E3 ubiquitin ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DNA damage-binding protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027595985.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mSorAra2.pri

Genomic

  1. NC_073307.1 Reference mSorAra2.pri

    Range
    148252018..148276652
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_055142622.1 → XP_054998597.1  DNA damage-binding protein 2 isoform X1

  2. XM_055142624.1 → XP_054998599.1  DNA damage-binding protein 2 isoform X3

    Related
    ENSSARP00000022220.1, ENSSART00000021029.1

  3. XM_055142623.1 → XP_054998598.1  DNA damage-binding protein 2 isoform X2

    Related
    ENSSARP00000002113.2, ENSSART00000002330.2

RNA

  1. XR_008630731.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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