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SMG7 SMG7 nonsense mediated mRNA decay factor [ Sorex araneus (European shrew) ]

Gene ID: 101547431, updated on 8-Mar-2024

Summary

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Gene symbol
SMG7
Gene description
SMG7 nonsense mediated mRNA decay factor
See related
EnsemblRapid:ENSSARG00000024197
Gene type
protein coding
RefSeq status
MODEL
Organism
Sorex araneus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Eulipotyphla; Soricidae; Soricinae; Sorex
Orthologs
human mouse all
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Genomic context

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See SMG7 in Genome Data Viewer
Location:
chromosome: X
Exon count:
23
Annotation release Status Assembly Chr Location
RS_2023_04 current mSorAra2.pri (GCF_027595985.1) X NC_073313.1 (166852070..166876259)
101 previous assembly SorAra2.0 (GCF_000181275.1) Unplaced Scaffold NW_004545922.1 (2584681..2602458, complement)

Chromosome X - NC_073313.1Genomic Context describing neighboring genes Neighboring gene laminin subunit gamma 2 Neighboring gene small nucleolar RNA U13 Neighboring gene laminin subunit gamma 1 Neighboring gene neutrophil cytosolic factor 2 Neighboring gene actin related protein 2/3 complex subunit 5 Neighboring gene uncharacterized LOC129399680

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables telomerase RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables telomeric DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of telomerase holoenzyme complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nonsense-mediated mRNA decay factor SMG7
Names
smg-7 homolog, nonsense mediated mRNA decay factor

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027595985.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mSorAra2.pri

Genomic

  1. NC_073313.1 Reference mSorAra2.pri

    Range
    166852070..166876259
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_055121597.1 → XP_054977572.1  nonsense-mediated mRNA decay factor SMG7 isoform X1

  2. XM_055121600.1 → XP_054977575.1  nonsense-mediated mRNA decay factor SMG7 isoform X4

    Related
    ENSSARP00000023332.1, ENSSART00000040851.1

  3. XM_055121598.1 → XP_054977573.1  nonsense-mediated mRNA decay factor SMG7 isoform X2

  4. XM_055121599.1 → XP_054977574.1  nonsense-mediated mRNA decay factor SMG7 isoform X3

  5. XM_055121602.1 → XP_054977577.1  nonsense-mediated mRNA decay factor SMG7 isoform X5

Nucleotide Protein
Heading Accession and Version

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