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COL6A1 collagen type VI alpha 1 chain [ Ochotona princeps (American pika) ]

Gene ID: 101531922, updated on 8-Mar-2024

Summary

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Gene symbol
COL6A1
Gene description
collagen type VI alpha 1 chain
Gene type
protein coding
RefSeq status
MODEL
Organism
Ochotona princeps
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Ochotonidae; Ochotona
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 3
Exon count:
35
Annotation release Status Assembly Chr Location
RS_2023_07 current mOchPri1.hap1 (GCF_030435755.1) 3 NC_080834.1 (25261925..25276632, complement)
102 previous assembly OchPri4.0 (GCF_014633375.1) 14 NC_050549.1 (122368502..122388042)

Chromosome 3 - NC_080834.1Genomic Context describing neighboring genes Neighboring gene formimidoyltransferase cyclodeaminase Neighboring gene collagen type VI alpha 2 chain Neighboring gene poly(rC) binding protein 3 Neighboring gene dynein heavy chain-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
collagen alpha-1(VI) chain

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030435755.1-RS_2023_07

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOchPri1.hap1

Genomic

  1. NC_080834.1 Reference mOchPri1.hap1

    Range
    25261925..25276632 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_058661532.1 → XP_058517515.1  collagen alpha-1(VI) chain

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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