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rpf2 ribosome production factor 2 homolog [ Maylandia zebra (zebra mbuna) ]

Gene ID: 101481411, updated on 8-Mar-2024

Summary

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Gene symbol
rpf2
Gene description
ribosome production factor 2 homolog
See related
Ensembl:ENSMZEG00005015632
Gene type
protein coding
RefSeq status
MODEL
Organism
Maylandia zebra
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Maylandia; Maylandia zebra complex
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: LG15
Exon count:
10
Annotation release Status Assembly LG Location
104 current M_zebra_UMD2a (GCF_000238955.4) LG15 NC_036794.1 (25431580..25439035)
101 previous assembly MetZeb1.1 (GCF_000238955.1) Unplaced Scaffold NW_004531827.1 (1785318..1792781, complement)

Linkage Group LG15 - NC_036794.1Genomic Context describing neighboring genes Neighboring gene cyclin-dependent kinase 19 Neighboring gene adenosylmethionine decarboxylase 1 Neighboring gene solute carrier family 16 member 10 Neighboring gene major facilitator superfamily domain containing 4B

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables rRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ribosomal large subunit assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ribosome production factor 2 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Maylandia zebra Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference M_zebra_UMD2a Primary Assembly

Genomic

  1. NC_036794.1 Reference M_zebra_UMD2a Primary Assembly

    Range
    25431580..25439035
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014410344.2 → XP_014265830.1  ribosome production factor 2 homolog

    UniProtKB/TrEMBL
    A0A3P9CEY1
    Related
    ENSMZEP00005020843.1, ENSMZET00005021527.1
    Conserved Domains (1) summary
    cl00935
    Location:8 → 286
    Brix; Brix domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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