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cdyl2 chromodomain Y like 2 [ Maylandia zebra (zebra mbuna) ]

Gene ID: 101477406, updated on 21-Dec-2023

Summary

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Gene symbol
cdyl2
Gene description
chromodomain Y like 2
See related
Ensembl:ENSMZEG00005012284
Gene type
protein coding
RefSeq status
MODEL
Organism
Maylandia zebra
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Maylandia; Maylandia zebra complex
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Genomic context

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See cdyl2 in Genome Data Viewer
Location:
chromosome: LG1
Exon count:
7
Annotation release Status Assembly LG Location
104 current M_zebra_UMD2a (GCF_000238955.4) LG1 NC_036780.1 (16784385..16832040)
101 previous assembly MetZeb1.1 (GCF_000238955.1) Unplaced Scaffold NW_004531713.1 (583882..630862, complement)

Linkage Group LG1 - NC_036780.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106676354 Neighboring gene MAF bZIP transcription factor a Neighboring gene centromere protein N Neighboring gene C-x(9)-C motif containing 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transcription corepressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
chromodomain Y-like protein 2
Names
chromodomain protein, Y-like 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Maylandia zebra Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference M_zebra_UMD2a Primary Assembly

Genomic

  1. NC_036780.1 Reference M_zebra_UMD2a Primary Assembly

    Range
    16784385..16832040
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004539407.4 → XP_004539464.1  chromodomain Y-like protein 2

    See identical proteins and their annotated locations for XP_004539464.1

    UniProtKB/TrEMBL
    A0A3P9C2M0
    Related
    ENSMZEP00005016352.1, ENSMZET00005016871.1
    Conserved Domains (2) summary
    cd06558
    Location:257 → 453
    crotonase-like; Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily. This superfamily contains a diverse set of enzymes including enoyl-CoA hydratase, napthoate synthase, methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA dehydratase, and dienoyl-CoA isomerase. ...
    cd18634
    Location:6 → 56
    CD_CDY; chromodomain of the Chromodomain Y-like protein family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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