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ercc8 excision repair cross-complementation group 8 [ Maylandia zebra (zebra mbuna) ]

Gene ID: 101473009, updated on 8-Mar-2024

Summary

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Gene symbol
ercc8
Gene description
excision repair cross-complementation group 8
See related
Ensembl:ENSMZEG00005006069
Gene type
protein coding
RefSeq status
MODEL
Organism
Maylandia zebra
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Maylandia; Maylandia zebra complex
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: LG12
Exon count:
12
Annotation release Status Assembly LG Location
104 current M_zebra_UMD2a (GCF_000238955.4) LG12 NC_036791.1 (21054934..21069205, complement)
101 previous assembly MetZeb1.1 (GCF_000238955.1) Unplaced Scaffold NW_004531725.1 (5601225..5615459)

Linkage Group LG12 - NC_036791.1Genomic Context describing neighboring genes Neighboring gene phosphodiesterase 4D, cAMP-specific Neighboring gene ELOVL fatty acid elongase 7a Neighboring gene uncharacterized LOC111501739 Neighboring gene NADH:ubiquinone oxidoreductase complex assembly factor 2 Neighboring gene small integral membrane protein 15

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein polyubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transcription-coupled nucleotide-excision repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Cul4A-RING E3 ubiquitin ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of nucleotide-excision repair complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DNA excision repair protein ERCC-8
Names
ERCC excision repair 8, CSA ubiquitin ligase complex subunit

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Maylandia zebra Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference M_zebra_UMD2a Primary Assembly

Genomic

  1. NC_036791.1 Reference M_zebra_UMD2a Primary Assembly

    Range
    21054934..21069205 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004547211.5 → XP_004547268.1  DNA excision repair protein ERCC-8

    UniProtKB/TrEMBL
    A0A3P9BDI9, A0A3P9BDJ5
    Related
    ENSMZEP00005007994.1, ENSMZET00005008315.1
    Conserved Domains (2) summary
    cd00200
    Location:40 → 362
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:103 → 139
    7WD40; WD40 repeat [structural motif]
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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