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slc12a3 solute carrier family 12 member 3 [ Maylandia zebra (zebra mbuna) ]

Gene ID: 101472929, updated on 8-Mar-2024

Summary

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Gene symbol
slc12a3
Gene description
solute carrier family 12 member 3
See related
Ensembl:ENSMZEG00005002901
Gene type
protein coding
RefSeq status
MODEL
Organism
Maylandia zebra
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Maylandia; Maylandia zebra complex
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: LG7
Exon count:
26
Annotation release Status Assembly LG Location
104 current M_zebra_UMD2a (GCF_000238955.4) LG7 NC_036786.1 (64863954..64875389, complement)
101 previous assembly MetZeb1.1 (GCF_000238955.1) Unplaced Scaffold NW_004532090.1 (119883..131332)

Linkage Group LG7 - NC_036786.1Genomic Context describing neighboring genes Neighboring gene cholesteryl ester transfer protein, plasma Neighboring gene homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 Neighboring gene protein piccolo Neighboring gene uncharacterized LOC106676968

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sodium:potassium:chloride symporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell volume homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chloride ion homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chloride transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in potassium ion homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in potassium ion import across plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sodium ion homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sodium ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
solute carrier family 12 member 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Maylandia zebra Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference M_zebra_UMD2a Primary Assembly

Genomic

  1. NC_036786.1 Reference M_zebra_UMD2a Primary Assembly

    Range
    64863954..64875389 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004575787.3 → XP_004575844.1  solute carrier family 12 member 3

    UniProtKB/TrEMBL
    A0A3P9B1T1
    Related
    ENSMZEP00005003829.1, ENSMZET00005003982.1
    Conserved Domains (5) summary
    TIGR00930
    Location:60 → 1029
    2a30; K-Cl cotransporter
    pfam03522
    Location:656 → 1029
    SLC12; Solute carrier family 12
    pfam08403
    Location:46 → 110
    AA_permease_N; Amino acid permease N-terminal
    cl00337
    Location:568 → 608
    PT_UbiA; UbiA family of prenyltransferases (PTases)
    cl00456
    Location:156 → 587
    SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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