U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

brcc3 BRCA1/BRCA2-containing complex, subunit 3 [ Maylandia zebra (zebra mbuna) ]

Gene ID: 101472371, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
brcc3
Gene description
BRCA1/BRCA2-containing complex, subunit 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Maylandia zebra
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Maylandia; Maylandia zebra complex
Orthologs
human zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: LG7
Exon count:
1
Annotation release Status Assembly LG Location
104 current M_zebra_UMD2a (GCF_000238955.4) LG7 NC_036786.1 (31461651..31462720)
101 previous assembly MetZeb1.1 (GCF_000238955.1) Unplaced Scaffold NW_004531711.1 (17598396..17599466, complement)

Linkage Group LG7 - NC_036786.1Genomic Context describing neighboring genes Neighboring gene RAB27B, member RAS oncogene family Neighboring gene E3 ubiquitin/ISG15 ligase TRIM25-like Neighboring gene tripartite motif-containing protein 16-like Neighboring gene tripartite motif-containing protein 16-like

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cysteine-type deubiquitinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metallopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables polyubiquitin modification-dependent protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in double-strand break repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of BRCA1-A complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of BRISC complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
lys-63-specific deubiquitinase BRCC36

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Maylandia zebra Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference M_zebra_UMD2a Primary Assembly

Genomic

  1. NC_036786.1 Reference M_zebra_UMD2a Primary Assembly

    Range
    31461651..31462720
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004538520.2 → XP_004538577.1  lys-63-specific deubiquitinase BRCC36

    See identical proteins and their annotated locations for XP_004538577.1

    UniProtKB/TrEMBL
    A0A3P9C9T0
    Conserved Domains (1) summary
    cd08068
    Location:3 → 240
    MPN_BRCC36; Mov34/MPN/PAD-1 family: BRCC36, a subunit of BRCA1-A complex
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.