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trim65 tripartite motif containing 65 [ Maylandia zebra (zebra mbuna) ]

Gene ID: 101467606, updated on 8-Mar-2024

Summary

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Gene symbol
trim65
Gene description
tripartite motif containing 65
See related
Ensembl:ENSMZEG00005006011
Gene type
protein coding
RefSeq status
MODEL
Organism
Maylandia zebra
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Maylandia; Maylandia zebra complex
Orthologs
zebrafish all
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Genomic context

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Location:
chromosome: LG8
Exon count:
8
Annotation release Status Assembly LG Location
104 current M_zebra_UMD2a (GCF_000238955.4) LG8 NC_036787.1 (3425785..3431284, complement)
101 previous assembly MetZeb1.1 (GCF_000238955.1) Unplaced Scaffold NW_004531762.1 (458580..464079, complement)

Linkage Group LG8 - NC_036787.1Genomic Context describing neighboring genes Neighboring gene unk zinc finger Neighboring gene unc-13 homolog D (C. elegans) Neighboring gene WW domain binding protein 2 Neighboring gene mitochondrial ribosomal protein L38 Neighboring gene S-antigen protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tripartite motif-containing protein 65

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Maylandia zebra Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference M_zebra_UMD2a Primary Assembly

Genomic

  1. NC_036787.1 Reference M_zebra_UMD2a Primary Assembly

    Range
    3425785..3431284 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004557491.3 → XP_004557548.1  tripartite motif-containing protein 65

    See identical proteins and their annotated locations for XP_004557548.1

    UniProtKB/TrEMBL
    A0A3P9BDC9, A0A3P9BDD5
    Related
    ENSMZEP00005007887.1, ENSMZET00005008206.1
    Conserved Domains (3) summary
    pfam00643
    Location:104 → 140
    zf-B_box; B-box zinc finger
    pfam15227
    Location:17 → 60
    zf-C3HC4_4; zinc finger of C3HC4-type, RING
    cl02614
    Location:339 → 519
    SPRY; SPRY domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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