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TPCN1 two pore segment channel 1 [ Dasypus novemcinctus (nine-banded armadillo) ]

Gene ID: 101434556, updated on 8-Mar-2024

Summary

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Gene symbol
TPCN1
Gene description
two pore segment channel 1
See related
Ensembl:ENSDNOG00000014622
Gene type
protein coding
RefSeq status
MODEL
Organism
Dasypus novemcinctus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Xenarthra; Cingulata; Dasypodidae; Dasypus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 19
Exon count:
29
Annotation release Status Assembly Chr Location
RS_2023_07 current mDasNov1.hap2 (GCF_030445035.1) 19 NC_080691.1 (22912973..23012888)
102 previous assembly Dasnov3.0 (GCF_000208655.1) Unplaced Scaffold NW_004475524.1 (241524..342108, complement)

Chromosome 19 - NC_080691.1Genomic Context describing neighboring genes Neighboring gene RBPJ interacting and tubulin associated 1 Neighboring gene IQ motif containing D Neighboring gene solute carrier family 8 member B1 Neighboring gene phospholipase B domain containing 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables monoatomic ion channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables voltage-gated channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in monoatomic ion transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endosome membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in lysosomal membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
two pore channel protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030445035.1-RS_2023_07

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mDasNov1.hap2

Genomic

  1. NC_080691.1 Reference mDasNov1.hap2

    Range
    22912973..23012888
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004456148.4 → XP_004456205.1  two pore channel protein 1 isoform X1

    Related
    ENSDNOP00000011340.3
    Conserved Domains (1) summary
    pfam00520
    Location:446 → 697
    Ion_trans; Ion transport protein

  2. XM_023588152.2 → XP_023443920.1  two pore channel protein 1 isoform X1

    Conserved Domains (1) summary
    pfam00520
    Location:446 → 697
    Ion_trans; Ion transport protein

  3. XM_004456147.4 → XP_004456204.1  two pore channel protein 1 isoform X2

    Conserved Domains (2) summary
    pfam00520
    Location:107 → 295
    Ion_trans; Ion transport protein
    pfam12325
    Location:674 → 744
    TMF_TATA_bd; TATA element modulatory factor 1 TATA binding
Nucleotide Protein
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