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LDB1 LIM domain binding 1 [ Dasypus novemcinctus (nine-banded armadillo) ]

Gene ID: 101423631, updated on 8-Mar-2024

Summary

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Gene symbol
LDB1
Gene description
LIM domain binding 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Dasypus novemcinctus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Xenarthra; Cingulata; Dasypodidae; Dasypus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 6
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2023_07 current mDasNov1.hap2 (GCF_030445035.1) 6 NC_080678.1 (37200435..37213688, complement)
102 previous assembly Dasnov3.0 (GCF_000208655.1) Unplaced Scaffold NW_004458668.1 (2557..14091)

Chromosome 6 - NC_080678.1Genomic Context describing neighboring genes Neighboring gene HPS6 biogenesis of lysosomal organelles complex 2 subunit 3 Neighboring gene DNA-directed RNA polymerase I subunit RPA43-like Neighboring gene uncharacterized LOC131278699 Neighboring gene PPARG related coactivator 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables LIM domain binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nervous system development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of transcription regulator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LIM domain-binding protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030445035.1-RS_2023_07

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mDasNov1.hap2

Genomic

  1. NC_080678.1 Reference mDasNov1.hap2

    Range
    37200435..37213688 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_058298579.1 → XP_058154562.1  LIM domain-binding protein 1 isoform X4

  2. XM_058298580.1 → XP_058154563.1  LIM domain-binding protein 1 isoform X5

  3. XM_058298576.1 → XP_058154559.1  LIM domain-binding protein 1 isoform X2

  4. XM_058298575.1 → XP_058154558.1  LIM domain-binding protein 1 isoform X1

  5. XM_058298578.1 → XP_058154561.1  LIM domain-binding protein 1 isoform X3

Nucleotide Protein
Heading Accession and Version

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