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CRISPLD2 cysteine rich secretory protein LCCL domain containing 2 [ Odobenus rosmarus divergens (Pacific walrus) ]

Gene ID: 101383716, updated on 8-Mar-2024

Summary

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Gene symbol
CRISPLD2
Gene description
cysteine rich secretory protein LCCL domain containing 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Odobenus rosmarus divergens (sub-species: divergens)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Odobenidae; Odobenus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
101 current Oros_1.0 (GCF_000321225.1) Unplaced Scaffold NW_004450269.1 (6424025..6484974)

NW_004450269.1Genomic Context describing neighboring genes Neighboring gene kelch like family member 36 Neighboring gene ubiquitin specific peptidase 10 Neighboring gene zinc finger DHHC-type palmitoyltransferase 7 Neighboring gene KIAA0513 ortholog

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004450269.1 Unplaced Scaffold Reference Oros_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cysteine-rich secretory protein LCCL domain-containing 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Odobenus rosmarus divergens Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Oros_1.0 Primary Assembly

Genomic

  1. NW_004450269.1 Reference Oros_1.0 Primary Assembly

    Range
    6424025..6484974
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004392094.1 → XP_004392151.1  cysteine-rich secretory protein LCCL domain-containing 2

    UniProtKB/TrEMBL
    A0A2U3VC81
    Conserved Domains (2) summary
    smart00603
    Location:286 → 370
    LCCL; LCCL domain
    cd05380
    Location:56 → 201
    SCP_euk; SCP_euk: SCP-like extracellular protein domain, as found mainly in eukaryotes. This family includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed ...
Nucleotide Protein
Heading Accession and Version

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