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STX2 syntaxin 2 [ Odobenus rosmarus divergens (Pacific walrus) ]

Gene ID: 101372152, updated on 8-Mar-2024

Summary

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Gene symbol
STX2
Gene description
syntaxin 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Odobenus rosmarus divergens (sub-species: divergens)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Odobenidae; Odobenus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
101 current Oros_1.0 (GCF_000321225.1) Unplaced Scaffold NW_004451263.1 (740427..771348, complement)

NW_004451263.1Genomic Context describing neighboring genes Neighboring gene piwi like RNA-mediated gene silencing 1 Neighboring gene RIMS binding protein 2 Neighboring gene RAN, member RAS oncogene family Neighboring gene adhesion G protein-coupled receptor D1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004451263.1 Unplaced Scaffold Reference Oros_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables SNAP receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables SNARE binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in exocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in synaptic vesicle fusion to presynaptic active zone membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle docking IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of SNARE complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endomembrane system IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in presynaptic active zone membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in synaptic vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
syntaxin-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Odobenus rosmarus divergens Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Oros_1.0 Primary Assembly

Genomic

  1. NW_004451263.1 Reference Oros_1.0 Primary Assembly

    Range
    740427..771348 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004415455.2 → XP_004415512.1  syntaxin-2 isoform X2

    UniProtKB/TrEMBL
    A0A2U3X0H2
    Conserved Domains (3) summary
    cd00179
    Location:29 → 180
    SynN; Syntaxin N-terminus domain; syntaxins are nervous system-specific proteins implicated in the docking of synaptic vesicles with the presynaptic plasma membrane; they are a family of receptors for intracellular transport vesicles; each target membrane may ...
    cd15882
    Location:190 → 258
    SNARE_syntaxin2; SNARE motif of syntaxin 2
    pfam00804
    Location:29 → 226
    Syntaxin; Syntaxin

  2. XM_004415454.2 → XP_004415511.1  syntaxin-2 isoform X1

    UniProtKB/TrEMBL
    A0A2U3X0H8
    Conserved Domains (3) summary
    cd00179
    Location:29 → 180
    SynN; Syntaxin N-terminus domain; syntaxins are nervous system-specific proteins implicated in the docking of synaptic vesicles with the presynaptic plasma membrane; they are a family of receptors for intracellular transport vesicles; each target membrane may ...
    cd15882
    Location:190 → 258
    SNARE_syntaxin2; SNARE motif of syntaxin 2
    pfam00804
    Location:29 → 226
    Syntaxin; Syntaxin
Nucleotide Protein
Heading Accession and Version

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