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SRCAP Snf2 related CREBBP activator protein [ Trichechus manatus latirostris (Florida manatee) ]

Gene ID: 101351006, updated on 8-Mar-2024

Summary

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Gene symbol
SRCAP
Gene description
Snf2 related CREBBP activator protein
See related
EnsemblRapid:ENSTMLG00000015531
Gene type
protein coding
RefSeq status
MODEL
Organism
Trichechus manatus latirostris (sub-species: latirostris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Sirenia; Trichechidae; Trichechus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
32
Annotation release Status Assembly Chr Location
RS_2024_01 current TriManLat1.0 (GCF_000243295.1) Unplaced Scaffold NW_004444106.1 (3254637..3282040)

NW_004444106.1Genomic Context describing neighboring genes Neighboring gene proline rich 14 Neighboring gene fibrosin Neighboring gene small nucleolar RNA SNORA30/SNORA37 family Neighboring gene transmembrane protein 265 Neighboring gene phosphorylase kinase catalytic subunit gamma 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004444106 Unplaced Scaffold Reference TriManLat1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP-dependent chromatin remodeler activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables histone binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chromatin remodeling IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Swr1 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
helicase SRCAP

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000243295.1-RS_2024_01

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference TriManLat1.0 Primary Assembly

Genomic

  1. NW_004444106.1 Reference TriManLat1.0 Primary Assembly

    Range
    3254637..3282040
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023741038.1 → XP_023596806.1  helicase SRCAP

    UniProtKB/TrEMBL
    A0A2Y9RT72
    Related
    ENSTMLP00000021900.1, ENSTMLT00000023479.1
    Conserved Domains (5) summary
    pfam00176
    Location:631 → 917
    SNF2_N; SNF2 family N-terminal domain
    pfam07529
    Location:127 → 196
    HSA; HSA
    cl25672
    Location:2247 → 2338
    MukB_hinge; MukB hinge domain
    cl26464
    Location:1353 → 1844
    Atrophin-1; Atrophin-1 family
    cl26465
    Location:2037 → 2206
    SNF2_N; SNF2 family N-terminal domain
Nucleotide Protein
Heading Accession and Version

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