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NSFL1C NSFL1 cofactor [ Tursiops truncatus (common bottlenose dolphin) ]

Gene ID: 101332083, updated on 8-Mar-2024

Summary

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Gene symbol
NSFL1C
Gene description
NSFL1 cofactor
See related
EnsemblRapid:ENSTTRG00000012928
Gene type
protein coding
RefSeq status
MODEL
Organism
Tursiops truncatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Tursiops
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 15
Exon count:
10
Annotation release Status Assembly Chr Location
102 current mTurTru1.mat.Y (GCF_011762595.1) 15 NC_047048.1 (58353913..58375503)
101 previous assembly NIST Tur_tru v1 (GCF_001922835.1) Unplaced Scaffold NW_017844299.1 (5485589..5507229, complement)

Chromosome 15 - NC_047048.1Genomic Context describing neighboring genes Neighboring gene protein POF1B-like Neighboring gene signal regulatory protein beta 2 Neighboring gene FKBP prolyl isomerase 1A Neighboring gene uncharacterized LOC109552664

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Golgi organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in autophagosome assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in membrane fusion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nuclear membrane reassembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
NSFL1 cofactor p47

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Tursiops truncatus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mTurTru1.mat.Y Primary Assembly

Genomic

  1. NC_047048.1 Reference mTurTru1.mat.Y Primary Assembly

    Range
    58353913..58375503
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019950857.2 → XP_019806416.1  NSFL1 cofactor p47 isoform X4

    UniProtKB/TrEMBL
    A0A2U4CLU1
    Conserved Domains (3) summary
    cd01770
    Location:257 → 335
    p47_UBX; p47-like ubiquitin domain
    cd14348
    Location:7 → 45
    UBA_p47; UBA-like domain found in NSFL1 cofactor p47 and similar proteins
    cl02662
    Location:189 → 230
    SEP; SEP domain

  2. XM_019950855.2 → XP_019806414.1  NSFL1 cofactor p47 isoform X1

    UniProtKB/TrEMBL
    A0A2U4CLV0
    Conserved Domains (3) summary
    cd01770
    Location:303 → 381
    p47_UBX; p47-like ubiquitin domain
    smart00553
    Location:189 → 281
    SEP; Domain present in Saccharomyces cerevisiae Shp1, Drosophila melanogaster eyes closed gene (eyc), and vertebrate p47
    cd14348
    Location:7 → 45
    UBA_p47; UBA-like domain found in NSFL1 cofactor p47 and similar proteins

  3. XM_004326898.3 → XP_004326946.1  NSFL1 cofactor p47 isoform X2

    UniProtKB/TrEMBL
    A0A2U3V8Q1
    Related
    ENSTTRP00000016794.1, ENSTTRT00000026929.1
    Conserved Domains (3) summary
    smart00553
    Location:180 → 272
    SEP; Domain present in Saccharomyces cerevisiae Shp1, Drosophila melanogaster eyes closed gene (eyc), and vertebrate p47
    cd14348
    Location:7 → 45
    UBA_p47; UBA-like domain found in NSFL1 cofactor p47 and similar proteins
    cd17162
    Location:291 → 372
    UBX_UBXN2C; Ubiquitin regulatory domain X (UBX) found in NSFL1 cofactor (also known as UBX domain-containing protein 2C (UBXN2C) and similar proteins

  4. XM_004326899.3 → XP_004326947.1  NSFL1 cofactor p47 isoform X3

    UniProtKB/TrEMBL
    A0A2U3V8B0
    Related
    ENSTTRP00000033361.1, ENSTTRT00000041295.1
    Conserved Domains (3) summary
    smart00553
    Location:178 → 270
    SEP; Domain present in Saccharomyces cerevisiae Shp1, Drosophila melanogaster eyes closed gene (eyc), and vertebrate p47
    cd14348
    Location:7 → 45
    UBA_p47; UBA-like domain found in NSFL1 cofactor p47 and similar proteins
    cd17162
    Location:289 → 370
    UBX_UBXN2C; Ubiquitin regulatory domain X (UBX) found in NSFL1 cofactor (also known as UBX domain-containing protein 2C (UBXN2C) and similar proteins
Nucleotide Protein
Heading Accession and Version

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