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SLC66A2 solute carrier family 66 member 2 [ Orcinus orca (killer whale) ]

Gene ID: 101284025, updated on 8-Mar-2024

Summary

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Gene symbol
SLC66A2
Gene description
solute carrier family 66 member 2
See related
EnsemblRapid:ENSOORG00010005886
Gene type
protein coding
RefSeq status
MODEL
Organism
Orcinus orca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Orcinus
Also known as
PQLC1
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 15
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_02 current mOrcOrc1.1 (GCF_937001465.1) 15 NC_064573.1 (438771..488700)

Chromosome 15 - NC_064573.1Genomic Context describing neighboring genes Neighboring gene glyoxylate/hydroxypyruvate reductase B-like Neighboring gene thioredoxin like 4A Neighboring gene heat shock factor binding protein 1 like 1 Neighboring gene uncharacterized LOC125961321 Neighboring gene potassium voltage-gated channel modifier subfamily G member 2 Neighboring gene CTD phosphatase subunit 1 Neighboring gene uncharacterized LOC117196673

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_064573.1 Chromosome 15 Reference mOrcOrc1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in phospholipid translocation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in retrograde transport, endosome to Golgi IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in trans-Golgi network IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
solute carrier family 66 member 2
Names
PQ loop repeat containing 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_937001465.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOrcOrc1.1 Primary Assembly

Genomic

  1. NC_064573.1 Reference mOrcOrc1.1 Primary Assembly

    Range
    438771..488700
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_049698596.1 → XP_049554553.1  solute carrier family 66 member 2 isoform X3

    Related
    ENSOORP00010006966.1, ENSOORT00010008490.1

  2. XM_033406163.2 → XP_033262054.1  solute carrier family 66 member 2 isoform X1

    Conserved Domains (1) summary
    pfam04193
    Location:169 → 229
    PQ-loop; PQ loop repeat

  3. XM_049698595.1 → XP_049554552.1  solute carrier family 66 member 2 isoform X1

    Related
    ENSOORP00010006968.1, ENSOORT00010008492.1

  4. XM_033406165.2 → XP_033262056.1  solute carrier family 66 member 2 isoform X2

    Related
    ENSOORP00010006969.1, ENSOORT00010008493.1
    Conserved Domains (1) summary
    pfam04193
    Location:152 → 212
    PQ-loop; PQ loop repeat
Nucleotide Protein
Heading Accession and Version

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