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POLR3B RNA polymerase III subunit B [ Orcinus orca (killer whale) ]

Gene ID: 101283825, updated on 8-Mar-2024

Summary

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Gene symbol
POLR3B
Gene description
RNA polymerase III subunit B
See related
EnsemblRapid:ENSOORG00010007950
Gene type
protein coding
RefSeq status
MODEL
Organism
Orcinus orca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Orcinus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 11
Exon count:
31
Annotation release Status Assembly Chr Location
RS_2023_02 current mOrcOrc1.1 (GCF_937001465.1) 11 NC_064569.1 (87079230..87201801)

Chromosome 11 - NC_064569.1Genomic Context describing neighboring genes Neighboring gene cytoskeleton associated protein 4 Neighboring gene t-complex 11 like 2 Neighboring gene U6 spliceosomal RNA Neighboring gene regulatory factor X4 Neighboring gene RIC8 guanine nucleotide exchange factor B Neighboring gene uncharacterized LOC117201139

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_064569.1 Chromosome 11 Reference mOrcOrc1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-directed 5'-3' RNA polymerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ribonucleoside binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of RNA polymerase III complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DNA-directed RNA polymerase III subunit RPC2
Names
polymerase (RNA) III (DNA directed) polypeptide B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_937001465.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOrcOrc1.1 Primary Assembly

Genomic

  1. NC_064569.1 Reference mOrcOrc1.1 Primary Assembly

    Range
    87079230..87201801
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033427562.2 → XP_033283453.1  DNA-directed RNA polymerase III subunit RPC2 isoform X3

    Conserved Domains (3) summary
    cd00653
    Location:39 → 1111
    RNA_pol_B_RPB2; RNA polymerase beta subunit. RNA polymerases catalyse the DNA dependent polymerization of RNA. Prokaryotes contain a single RNA polymerase compared to three in eukaryotes (not including mitochondrial. and chloroplast polymerases). Each RNA polymerase ...
    pfam04566
    Location:539 → 600
    RNA_pol_Rpb2_4; RNA polymerase Rpb2, domain 4
    pfam04567
    Location:621 → 661
    RNA_pol_Rpb2_5; RNA polymerase Rpb2, domain 5

  2. XM_033427561.2 → XP_033283452.1  DNA-directed RNA polymerase III subunit RPC2 isoform X1

    Conserved Domains (3) summary
    cd00653
    Location:39 → 1146
    RNA_pol_B_RPB2; RNA polymerase beta subunit. RNA polymerases catalyse the DNA dependent polymerization of RNA. Prokaryotes contain a single RNA polymerase compared to three in eukaryotes (not including mitochondrial. and chloroplast polymerases). Each RNA polymerase ...
    pfam04566
    Location:539 → 600
    RNA_pol_Rpb2_4; RNA polymerase Rpb2, domain 4
    pfam04567
    Location:621 → 661
    RNA_pol_Rpb2_5; RNA polymerase Rpb2, domain 5

  3. XM_004269423.3 → XP_004269471.1  DNA-directed RNA polymerase III subunit RPC2 isoform X2

    See identical proteins and their annotated locations for XP_004269471.1

    Related
    ENSOORP00010009837.1, ENSOORT00010011671.1
    Conserved Domains (3) summary
    cd00653
    Location:39 → 1127
    RNA_pol_B_RPB2; RNA polymerase beta subunit. RNA polymerases catalyse the DNA dependent polymerization of RNA. Prokaryotes contain a single RNA polymerase compared to three in eukaryotes (not including mitochondrial. and chloroplast polymerases). Each RNA polymerase ...
    pfam04566
    Location:539 → 600
    RNA_pol_Rpb2_4; RNA polymerase Rpb2, domain 4
    pfam04567
    Location:621 → 661
    RNA_pol_Rpb2_5; RNA polymerase Rpb2, domain 5

  4. XM_033427563.2 → XP_033283454.1  DNA-directed RNA polymerase III subunit RPC2 isoform X4

    Conserved Domains (3) summary
    cd00653
    Location:39 → 1109
    RNA_pol_B_RPB2; RNA polymerase beta subunit. RNA polymerases catalyse the DNA dependent polymerization of RNA. Prokaryotes contain a single RNA polymerase compared to three in eukaryotes (not including mitochondrial. and chloroplast polymerases). Each RNA polymerase ...
    pfam04566
    Location:539 → 600
    RNA_pol_Rpb2_4; RNA polymerase Rpb2, domain 4
    pfam04567
    Location:621 → 661
    RNA_pol_Rpb2_5; RNA polymerase Rpb2, domain 5
Nucleotide Protein
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