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ZNF140 zinc finger protein 140 [ Orcinus orca (killer whale) ]

Gene ID: 101278913, updated on 8-Mar-2024

Summary

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Gene symbol
ZNF140
Gene description
zinc finger protein 140
See related
EnsemblRapid:ENSOORG00010002937
Gene type
protein coding
RefSeq status
MODEL
Organism
Orcinus orca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Orcinus
Orthologs
human all
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Genomic context

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Location:
chromosome: 15
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2023_02 current mOrcOrc1.1 (GCF_937001465.1) 15 NC_064573.1 (89394523..89408039)

Chromosome 15 - NC_064573.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 26 Neighboring gene zinc finger protein 84 Neighboring gene zinc finger protein 891 Neighboring gene zinc finger protein 10

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_064573.1 Chromosome 15 Reference mOrcOrc1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein 140

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_937001465.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOrcOrc1.1 Primary Assembly

Genomic

  1. NC_064573.1 Reference mOrcOrc1.1 Primary Assembly

    Range
    89394523..89408039
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004276616.4 → XP_004276664.1  zinc finger protein 140 isoform X4

    Conserved Domains (5) summary
    smart00349
    Location:6 → 65
    KRAB; krueppel associated box
    COG5048
    Location:165 → 458
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:365 → 385
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam01352
    Location:6 → 45
    KRAB; KRAB box
    pfam13465
    Location:377 → 402
    zf-H2C2_2; Zinc-finger double domain

  2. XM_033440596.2 → XP_033296487.1  zinc finger protein 140 isoform X3

    Related
    ENSOORP00010003079.1, ENSOORT00010004052.1
    Conserved Domains (3) summary
    smart00349
    Location:6 → 66
    KRAB; krueppel associated box
    COG5048
    Location:166 → 459
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:366 → 386
    ZF_C2H2; C2H2 Zn finger [structural motif]

  3. XM_049698553.1 → XP_049554510.1  zinc finger protein 140 isoform X5

  4. XM_033440595.2 → XP_033296486.1  zinc finger protein 140 isoform X2

    Conserved Domains (3) summary
    smart00349
    Location:16 → 75
    KRAB; krueppel associated box
    COG5048
    Location:175 → 468
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:375 → 395
    ZF_C2H2; C2H2 Zn finger [structural motif]

  5. XM_033440594.2 → XP_033296485.1  zinc finger protein 140 isoform X1

    Conserved Domains (3) summary
    smart00349
    Location:16 → 76
    KRAB; krueppel associated box
    COG5048
    Location:176 → 469
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:376 → 396
    ZF_C2H2; C2H2 Zn finger [structural motif]

  6. XM_049698554.1 → XP_049554511.1  zinc finger protein 140 isoform X6

Nucleotide Protein
Heading Accession and Version

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