U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SHROOM4 shroom family member 4 [ Orcinus orca (killer whale) ]

Gene ID: 101278271, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
SHROOM4
Gene description
shroom family member 4
See related
EnsemblRapid:ENSOORG00010018842
Gene type
protein coding
RefSeq status
MODEL
Organism
Orcinus orca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Orcinus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: X
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2023_02 current mOrcOrc1.1 (GCF_937001465.1) X NC_064580.1 (45080087..45294367, complement)

Chromosome X - NC_064580.1Genomic Context describing neighboring genes Neighboring gene diacylglycerol kinase kappa Neighboring gene PIH1 domain-containing protein 2-like Neighboring gene U6 spliceosomal RNA Neighboring gene spermine synthase-like Neighboring gene bone morphogenetic protein 15 Neighboring gene uncharacterized LOC117197527

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_064580.1 Chromosome X Reference mOrcOrc1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actin filament organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in adherens junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in apical junction complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in apical plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cortical actin cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
protein Shroom4

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_937001465.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOrcOrc1.1 Primary Assembly

Genomic

  1. NC_064580.1 Reference mOrcOrc1.1 Primary Assembly

    Range
    45080087..45294367 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033409622.2 → XP_033265513.2  protein Shroom4 isoform X1

    Related
    ENSOORP00010024814.1, ENSOORT00010028199.1

  2. XM_033409626.2 → XP_033265517.2  protein Shroom4 isoform X5

  3. XM_033409623.2 → XP_033265514.2  protein Shroom4 isoform X2

  4. XM_049704572.1 → XP_049560529.1  protein Shroom4 isoform X3

  5. XM_049704571.1 → XP_049560528.1  protein Shroom4 isoform X2

  6. XM_033409624.2 → XP_033265515.2  protein Shroom4 isoform X2

  7. XM_033409625.2 → XP_033265516.2  protein Shroom4 isoform X4

    Related
    ENSOORP00010024811.1, ENSOORT00010028196.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.