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CHMP1A charged multivesicular body protein 1A [ Orcinus orca (killer whale) ]

Gene ID: 101270655, updated on 8-Mar-2024

Summary

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Gene symbol
CHMP1A
Gene description
charged multivesicular body protein 1A
See related
EnsemblRapid:ENSOORG00010008500
Gene type
protein coding
RefSeq status
MODEL
Organism
Orcinus orca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Orcinus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 20
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2023_02 current mOrcOrc1.1 (GCF_937001465.1) 20 NC_064578.1 (318191..325115)

Chromosome 20 - NC_064578.1Genomic Context describing neighboring genes Neighboring gene spermatogenesis associated 2 like Neighboring gene cyclin dependent kinase 10 Neighboring gene dipeptidase 1 Neighboring gene copine 7

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_064578.1 Chromosome 20 Reference mOrcOrc1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in endosome transport via multivesicular body sorting pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in late endosome to vacuole transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of ESCRT III complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in multivesicular body IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
charged multivesicular body protein 1a

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_937001465.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOrcOrc1.1 Primary Assembly

Genomic

  1. NC_064578.1 Reference mOrcOrc1.1 Primary Assembly

    Range
    318191..325115
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004280048.4 → XP_004280096.1  charged multivesicular body protein 1a isoform X2

    Related
    ENSOORP00010010506.1, ENSOORT00010012449.1
    Conserved Domains (1) summary
    cl21588
    Location:12 → 195
    Snf7

  2. XM_012536832.3 → XP_012392286.1  charged multivesicular body protein 1a isoform X1

    Related
    ENSOORP00010010505.1, ENSOORT00010012448.1
    Conserved Domains (1) summary
    cl21588
    Location:16 → 199
    Snf7
Nucleotide Protein
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