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LOC101260444 transcription factor RAX1-like [ Solanum lycopersicum (tomato) ]

Gene ID: 101260444, updated on 6-Oct-2023

Summary

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Gene symbol
LOC101260444
Gene description
transcription factor RAX1-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Solanum lycopersicum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Solanum subgen. Lycopersicon
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Genomic context

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Location:
chromosome: 6
Exon count:
3
Annotation release Status Assembly Chr Location
103 current SL3.0 (GCF_000188115.4) 6 NC_015443.3 (46555530..46557881)
102 previous assembly SL2.50 (GCF_000188115.3) 6 NC_015443.2 (46414042..46416379)

Chromosome 6 - NC_015443.3Genomic Context describing neighboring genes Neighboring gene sister chromatid cohesion 1 protein 1 Neighboring gene uncharacterized LOC101267613 Neighboring gene uncharacterized LOC101267317 Neighboring gene heavy metal-associated isoprenylated plant protein 3 Neighboring gene ABC transporter F family member 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
transcription factor RAX1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Solanum lycopersicum Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SL3.0 Primary Assembly

Genomic

  1. NC_015443.3 Reference SL3.0 Primary Assembly

    Range
    46555530..46557881
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004242053.4 → XP_004242101.1  transcription factor RAX1-like

    UniProtKB/TrEMBL
    A0A3Q7H0Q3
    Conserved Domains (3) summary
    smart00717
    Location:14 → 64
    SANT; SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
    pfam00249
    Location:14 → 62
    Myb_DNA-binding; Myb-like DNA-binding domain
    pfam13921
    Location:71 → 117
    Myb_DNA-bind_6; Myb-like DNA-binding domain
Nucleotide Protein
Heading Accession and Version

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