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LOC101207254 alanine aminotransferase 2 [ Cucumis sativus (cucumber) ]

Gene ID: 101207254, updated on 14-Dec-2023

Summary

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Gene symbol
LOC101207254
Gene description
alanine aminotransferase 2
Locus tag
Csa_001161
Gene type
protein coding
RefSeq status
MODEL
Organism
Cucumis sativus
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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Genomic context

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Location:
chromosome: 3
Exon count:
15
Annotation release Status Assembly Chr Location
102 current Cucumber_9930_V3 (GCF_000004075.3) 3 NC_026657.2 (26795615..26801430, complement)
101 previous assembly ASM407v2 (GCF_000004075.2) 3 NC_026657.1 (25532936..25538786, complement)

Chromosome 3 - NC_026657.2Genomic Context describing neighboring genes Neighboring gene AT-rich interactive domain-containing protein 4 Neighboring gene hypothetical protein Neighboring gene uncharacterized LOC101207750 Neighboring gene pectinesterase 3 Neighboring gene uncharacterized LOC101216248

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-alanine:2-oxoglutarate aminotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pyridoxal phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alanine aminotransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cucumis sativus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cucumber_9930_V3 Primary Assembly

Genomic

  1. NC_026657.2 Reference Cucumber_9930_V3 Primary Assembly

    Range
    26795615..26801430 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004144396.3 → XP_004144444.2  alanine aminotransferase 2

    See identical proteins and their annotated locations for XP_004144444.2

    UniProtKB/TrEMBL
    A0A0A0LC12
    Conserved Domains (1) summary
    PLN02231
    Location:57 → 535
    PLN02231; alanine transaminase
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases