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auh AU RNA binding protein/enoyl-CoA hydratase [ Oryzias latipes (Japanese medaka) ]

Gene ID: 101174801, updated on 8-Mar-2024

Summary

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Gene symbol
auh
Gene description
AU RNA binding protein/enoyl-CoA hydratase
See related
EnsemblRapid:ENSORLG00000020225
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryzias latipes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Beloniformes; Adrianichthyidae; Oryziinae; Oryzias
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 12
Exon count:
10
Annotation release Status Assembly Chr Location
103 current ASM223467v1 (GCF_002234675.1) 12 NC_019870.2 (27589892..27597073, complement)
102 previous assembly ASM31367v1 (GCF_000313675.1) Unplaced Scaffold NW_004089948.1 (281..5859, complement)

Chromosome 12 - NC_019870.2Genomic Context describing neighboring genes Neighboring gene spleen tyrosine kinase Neighboring gene chromodomain helicase DNA binding protein 1 Neighboring gene nuclear factor, interleukin 3 regulated Neighboring gene receptor tyrosine kinase-like orphan receptor 2 Neighboring gene uncharacterized LOC105355328

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables enoyl-CoA hydratase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid beta-oxidation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
methylglutaconyl-CoA hydratase, mitochondrial
Names
AU RNA binding methylglutaconyl-CoA hydratase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oryzias latipes Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM223467v1 Primary Assembly

Genomic

  1. NC_019870.2 Reference ASM223467v1 Primary Assembly

    Range
    27589892..27597073 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023960664.1 → XP_023816432.1  methylglutaconyl-CoA hydratase, mitochondrial

    UniProtKB/TrEMBL
    A0A3P9JIB0, H2N100
    Related
    ENSORLP00000025083.3, ENSORLT00000025084.3
    Conserved Domains (1) summary
    cl23717
    Location:70 → 323
    crotonase-like; Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily. This superfamily contains a diverse set of enzymes including enoyl-CoA hydratase, napthoate synthase, methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA dehydratase, and dienoyl-CoA isomerase. ...
Nucleotide Protein
Heading Accession and Version

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