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psmd8 proteasome 26S subunit, non-ATPase 8 [ Oryzias latipes (Japanese medaka) ]

Gene ID: 101168061, updated on 8-Mar-2024

Summary

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Gene symbol
psmd8
Gene description
proteasome 26S subunit, non-ATPase 8
See related
EnsemblRapid:ENSORLG00000002285
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryzias latipes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Beloniformes; Adrianichthyidae; Oryziinae; Oryzias
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 13
Exon count:
7
Annotation release Status Assembly Chr Location
103 current ASM223467v1 (GCF_002234675.1) 13 NC_019871.2 (5062920..5066124)
102 previous assembly ASM31367v1 (GCF_000313675.1) 13 NC_019871.1 (4059602..4062806)

Chromosome 13 - NC_019871.2Genomic Context describing neighboring genes Neighboring gene EH-domain containing 2b Neighboring gene nucleoporin 88 Neighboring gene sprouty related EVH1 domain containing 3 Neighboring gene DEAH (Asp-Glu-Ala-His) box polypeptide 34

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of proteasome regulatory particle IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of proteasome regulatory particle, lid subcomplex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
26S proteasome non-ATPase regulatory subunit 8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oryzias latipes Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM223467v1 Primary Assembly

Genomic

  1. NC_019871.2 Reference ASM223467v1 Primary Assembly

    Range
    5062920..5066124
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011482276.1 → XP_011480578.1  26S proteasome non-ATPase regulatory subunit 8

    UniProtKB/TrEMBL
    A0A3P9HBJ0, H2LAC7
    Related
    ENSORLP00000002834.1, ENSORLT00000002835.3
    Conserved Domains (1) summary
    pfam10075
    Location:116 → 224
    CSN8_PSD8_EIF3K; CSN8/PSMD8/EIF3K family
Nucleotide Protein
Heading Accession and Version

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