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crip1 cysteine-rich protein 1 [ Oryzias latipes (Japanese medaka) ]

Gene ID: 101165269, updated on 12-Sep-2024

Summary

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Gene symbol
crip1
Gene description
cysteine-rich protein 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryzias latipes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Beloniformes; Adrianichthyidae; Oryziinae; Oryzias
Orthologs
zebrafish all
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Genomic context

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Location:
chromosome: 22
Exon count:
5
Annotation release Status Assembly Chr Location
103 current ASM223467v1 (GCF_002234675.1) 22 NC_019880.2 (4751483..4754437)
102 previous assembly ASM31367v1 (GCF_000313675.1) 22 NC_019880.1 (4023459..4026538)

Chromosome 22 - NC_019880.2Genomic Context describing neighboring genes Neighboring gene metastasis associated 1 Neighboring gene cysteine-rich protein 2 Neighboring gene mitotic deacetylase associated SANT domain protein b Neighboring gene prostaglandin reductase 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intrinsic apoptotic signaling pathway in response to DNA damage IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of gene expression IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cysteine-rich protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oryzias latipes Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM223467v1 Primary Assembly

Genomic

  1. NC_019880.2 Reference ASM223467v1 Primary Assembly

    Range
    4751483..4754437
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004082157.4 → XP_004082205.1  cysteine-rich protein 1

    UniProtKB/TrEMBL
    A0A3B3H8M0, A0A3B3HFI3, A0A3P9IDW0
    Conserved Domains (1) summary
    cd09478
    Location:4 → 57
    LIM_CRIP; The LIM domain of Cysteine-Rich Intestinal Protein (CRIP)
Nucleotide Protein
Heading Accession and Version

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