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nek1 NIMA-related kinase 1 [ Oryzias latipes (Japanese medaka) ]

Gene ID: 101160722, updated on 12-Sep-2024

Summary

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Gene symbol
nek1
Gene description
NIMA-related kinase 1
See related
EnsemblRapid:ENSORLG00000000439
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryzias latipes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Beloniformes; Adrianichthyidae; Oryziinae; Oryzias
Orthologs
zebrafish all
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Genomic context

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Location:
chromosome: 4
Exon count:
36
Annotation release Status Assembly Chr Location
103 current ASM223467v1 (GCF_002234675.1) 4 NC_019862.2 (1040069..1062213)
102 previous assembly ASM31367v1 (GCF_000313675.1) 4 NC_019862.1 (860649..883933, complement)

Chromosome 4 - NC_019862.2Genomic Context describing neighboring genes Neighboring gene ubiquitin specific peptidase 46 Neighboring gene uncharacterized LOC110016730 Neighboring gene SH3 domain containing ring finger 1 Neighboring gene carbonyl reductase 4 Neighboring gene palladin, cytoskeletal associated protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
serine/threonine-protein kinase Nek1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oryzias latipes Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM223467v1 Primary Assembly

Genomic

  1. NC_019862.2 Reference ASM223467v1 Primary Assembly

    Range
    1040069..1062213
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023953888.1 → XP_023809656.1  serine/threonine-protein kinase Nek1 isoform X1

    Related
    ENSORLP00000071549.1, ENSORLT00000060835.1
    Conserved Domains (1) summary
    cd08218
    Location:3 → 258
    STKc_Nek1; Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A (NIMA)-related kinase 1

  2. XM_023953889.1 → XP_023809657.1  serine/threonine-protein kinase Nek1 isoform X2

    Related
    ENSORLP00000069967.1, ENSORLT00000049155.1
    Conserved Domains (1) summary
    cd08218
    Location:3 → 258
    STKc_Nek1; Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A (NIMA)-related kinase 1

RNA

  1. XR_002873127.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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