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slc39a8 solute carrier family 39 member 8 [ Oryzias latipes (Japanese medaka) ]

Gene ID: 101159549, updated on 12-Sep-2024

Summary

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Gene symbol
slc39a8
Gene description
solute carrier family 39 member 8
See related
EnsemblRapid:ENSORLG00000018167
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryzias latipes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Beloniformes; Adrianichthyidae; Oryziinae; Oryzias
Orthologs
zebrafish all
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Genomic context

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Location:
chromosome: 22
Exon count:
8
Annotation release Status Assembly Chr Location
103 current ASM223467v1 (GCF_002234675.1) 22 NC_019880.2 (25364936..25391485)
102 previous assembly ASM31367v1 (GCF_000313675.1) 22 NC_019880.1 (25625492..25652001)

Chromosome 22 - NC_019880.2Genomic Context describing neighboring genes Neighboring gene ubiquitin-conjugating enzyme E2 D2 Neighboring gene mannosidase, beta A, lysosomal Neighboring gene probable N-acetyltransferase CML1 Neighboring gene N-acetyltransferase 8

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables zinc ion transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular zinc ion homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in zinc ion import across plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc transporter ZIP8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oryzias latipes Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM223467v1 Primary Assembly

Genomic

  1. NC_019880.2 Reference ASM223467v1 Primary Assembly

    Range
    25364936..25391485
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004082785.4 → XP_004082833.1  zinc transporter ZIP8

    UniProtKB/TrEMBL
    A0A3P9HD78, A0A3P9M0I6, H2MVC0
    Related
    ENSORLP00000022750.3, ENSORLT00000022751.3
    Conserved Domains (1) summary
    pfam02535
    Location:129 → 446
    Zip; ZIP Zinc transporter
Nucleotide Protein
Heading Accession and Version

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