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eif5a eukaryotic translation initiation factor 5A [ Oryzias latipes (Japanese medaka) ]

Gene ID: 101159469, updated on 9-Nov-2023

Summary

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Gene symbol
eif5a
Gene description
eukaryotic translation initiation factor 5A
See related
EnsemblRapid:ENSORLG00000025568
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryzias latipes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Beloniformes; Adrianichthyidae; Oryziinae; Oryzias
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Genomic context

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Location:
chromosome: 18
Exon count:
6
Annotation release Status Assembly Chr Location
103 current ASM223467v1 (GCF_002234675.1) 18 NC_019876.2 (14455966..14465829, complement)
102 previous assembly ASM31367v1 (GCF_000313675.1) 18 NC_019876.1 (14972560..14982399, complement)

Chromosome 18 - NC_019876.2Genomic Context describing neighboring genes Neighboring gene GABA(A) receptor-associated protein a Neighboring gene G protein pathway suppressor 2 Neighboring gene Y-box binding protein 2 Neighboring gene solute carrier family 2 member 4 Neighboring gene tumor protein p53

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ribosome binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables translation elongation factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of translational elongation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of translational termination IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
eukaryotic translation initiation factor 5A-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oryzias latipes Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM223467v1 Primary Assembly

Genomic

  1. NC_019876.2 Reference ASM223467v1 Primary Assembly

    Range
    14455966..14465829 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020711647.2 → XP_020567306.1  eukaryotic translation initiation factor 5A-1

    UniProtKB/TrEMBL
    A0A3B3IGB1, A0A3P9HFH7, A0A3P9KMD9
    Related
    ENSORLP00000053330.1, ENSORLT00000086665.1
    Conserved Domains (1) summary
    cl28432
    Location:1 → 155
    PRK03999; translation initiation factor IF-5A; Provisional

  2. XM_004079798.4 → XP_004079846.1  eukaryotic translation initiation factor 5A-1

    UniProtKB/TrEMBL
    A0A3B3IGB1, A0A3P9HFH7, A0A3P9KMD9
    Related
    ENSORLP00000043120.2, ENSORLT00000046838.2
    Conserved Domains (1) summary
    cl28432
    Location:1 → 155
    PRK03999; translation initiation factor IF-5A; Provisional
Nucleotide Protein
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