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BCOR BCL6 corepressor [ Gorilla gorilla gorilla (western lowland gorilla) ]

Gene ID: 101124248, updated on 11-Mar-2024

Summary

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Gene symbol
BCOR
Gene description
BCL6 corepressor
See related
Ensembl:ENSGGOG00000014889
Gene type
protein coding
RefSeq status
MODEL
Organism
Gorilla gorilla gorilla (sub-species: gorilla)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Gorilla
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: X
Exon count:
19
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mGorGor1-v2.0_pri (GCF_029281585.2) X NC_073247.2 (50417183..50542725, complement)
RS_2023_04 previous assembly NHGRI_mGorGor1-v1.1-0.2.freeze_pri (GCF_029281585.1) X NC_073247.1 (50426160..50551757, complement)

Chromosome X - NC_073247.2Genomic Context describing neighboring genes Neighboring gene glyceraldehyde-3-phosphate dehydrogenase-like Neighboring gene small ribosomal subunit protein uS17-like Neighboring gene uncharacterized LOC101130537 Neighboring gene small nucleolar RNA U13 Neighboring gene inosine-5'-monophosphate dehydrogenase 1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription corepressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
BCL-6 corepressor

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029281585.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mGorGor1-v2.0_pri Primary Assembly

Genomic

  1. NC_073247.2 Reference NHGRI_mGorGor1-v2.0_pri Primary Assembly

    Range
    50417183..50542725 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004064010.5 → XP_004064058.1  BCL-6 corepressor isoform X3

    Conserved Domains (5) summary
    cd14261
    Location:1598 → 1712
    PUFD; PCGF Ub-like fold discriminator of BCOR
    pfam05109
    Location:257 → 673
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    sd00045
    Location:1429 → 1460
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:1433 → 1524
    Ank_2; Ankyrin repeats (3 copies)
    pfam15808
    Location:1168 → 1380
    BCOR; BCL-6 co-repressor, non-ankyrin-repeat region

  2. XM_004064012.5 → XP_004064060.1  BCL-6 corepressor isoform X4

    Conserved Domains (5) summary
    cd14261
    Location:1580 → 1694
    PUFD; PCGF Ub-like fold discriminator of BCOR
    pfam05109
    Location:257 → 673
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    sd00045
    Location:1411 → 1442
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:1415 → 1506
    Ank_2; Ankyrin repeats (3 copies)
    pfam15808
    Location:1150 → 1362
    BCOR; BCL-6 co-repressor, non-ankyrin-repeat region

  3. XM_004064011.5 → XP_004064059.1  BCL-6 corepressor isoform X1

    UniProtKB/TrEMBL
    G3RG00
    Conserved Domains (5) summary
    cd14261
    Location:1632 → 1746
    PUFD; PCGF Ub-like fold discriminator of BCOR
    pfam05109
    Location:257 → 673
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    sd00045
    Location:1463 → 1494
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:1467 → 1558
    Ank_2; Ankyrin repeats (3 copies)
    pfam15808
    Location:1202 → 1414
    BCOR; BCL-6 co-repressor, non-ankyrin-repeat region

  4. XM_063703125.1 → XP_063559195.1  BCL-6 corepressor isoform X3

  5. XM_055376418.1 → XP_055232393.1  BCL-6 corepressor isoform X1

    UniProtKB/TrEMBL
    G3RG00

  6. XM_055376415.2 → XP_055232390.1  BCL-6 corepressor isoform X1

    UniProtKB/TrEMBL
    G3RG00

  7. XM_063703126.1 → XP_063559196.1  BCL-6 corepressor isoform X3

  8. XM_063703127.1 → XP_063559197.1  BCL-6 corepressor isoform X4

  9. XM_019019639.4 → XP_018875184.1  BCL-6 corepressor isoform X1

    UniProtKB/TrEMBL
    G3RG00
    Related
    ENSGGOP00000014533.2
    Conserved Domains (5) summary
    cd14261
    Location:1632 → 1746
    PUFD; PCGF Ub-like fold discriminator of BCOR
    pfam05109
    Location:257 → 673
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    sd00045
    Location:1463 → 1494
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:1467 → 1558
    Ank_2; Ankyrin repeats (3 copies)
    pfam15808
    Location:1202 → 1414
    BCOR; BCL-6 co-repressor, non-ankyrin-repeat region

  10. XM_055376424.2 → XP_055232399.1  BCL-6 corepressor isoform X4

  11. XM_031005979.3 → XP_030861839.1  BCL-6 corepressor isoform X2

    UniProtKB/TrEMBL
    A0A2I2Z275
    Conserved Domains (5) summary
    cd14261
    Location:1614 → 1728
    PUFD; PCGF Ub-like fold discriminator of BCOR
    pfam05109
    Location:257 → 673
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    sd00045
    Location:1445 → 1476
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:1449 → 1540
    Ank_2; Ankyrin repeats (3 copies)
    pfam15808
    Location:1184 → 1396
    BCOR; BCL-6 co-repressor, non-ankyrin-repeat region

  12. XM_031005980.3 → XP_030861840.1  BCL-6 corepressor isoform X3

    Conserved Domains (5) summary
    cd14261
    Location:1598 → 1712
    PUFD; PCGF Ub-like fold discriminator of BCOR
    pfam05109
    Location:257 → 673
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    sd00045
    Location:1429 → 1460
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:1433 → 1524
    Ank_2; Ankyrin repeats (3 copies)
    pfam15808
    Location:1168 → 1380
    BCOR; BCL-6 co-repressor, non-ankyrin-repeat region

  13. XM_031005978.3 → XP_030861838.1  BCL-6 corepressor isoform X1

    UniProtKB/TrEMBL
    G3RG00
    Conserved Domains (5) summary
    cd14261
    Location:1632 → 1746
    PUFD; PCGF Ub-like fold discriminator of BCOR
    pfam05109
    Location:257 → 673
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    sd00045
    Location:1463 → 1494
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:1467 → 1558
    Ank_2; Ankyrin repeats (3 copies)
    pfam15808
    Location:1202 → 1414
    BCOR; BCL-6 co-repressor, non-ankyrin-repeat region

  14. XM_055376419.2 → XP_055232394.1  BCL-6 corepressor isoform X1

    UniProtKB/TrEMBL
    G3RG00

  15. XM_063703128.1 → XP_063559198.1  BCL-6 corepressor isoform X5

Nucleotide Protein
Heading Accession and Version

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