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RORC RAR related orphan receptor C [ Ovis aries (sheep) ]

Gene ID: 101119104, updated on 6-Jun-2024

Summary

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Gene symbol
RORC
Gene description
RAR related orphan receptor C
See related
EnsemblRapid:ENSOARG00020018249
Gene type
protein coding
RefSeq status
MODEL
Organism
Ovis aries
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Ovis
Also known as
RORC2
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
16
Annotation release Status Assembly Chr Location
RS_2023_10 current ARS-UI_Ramb_v3.0 (GCF_016772045.2) 1 NC_056054.1 (101734833..101759932, complement)

Chromosome 1 - NC_056054.1Genomic Context describing neighboring genes Neighboring gene ornithine decarboxylase antizyme 3 Neighboring gene tudor and KH domain containing Neighboring gene leucine rich repeat and Ig domain containing 4 Neighboring gene C2 calcium dependent domain containing 4D Neighboring gene thioesterase superfamily member 5

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056054.1 Chromosome 1 Reference ARS-UI_Ramb_v3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nuclear receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nuclear receptor ROR-gamma
Names
retinoic acid related-orphan receptor gamma 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_016772045.2-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UI_Ramb_v3.0 Primary Assembly

Genomic

  1. NC_056054.1 Reference ARS-UI_Ramb_v3.0 Primary Assembly

    Range
    101734833..101759932 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027975081.3 → XP_027830882.1  nuclear receptor ROR-gamma isoform X8

    UniProtKB/TrEMBL
    A0A0F7YC39

  2. XM_027975055.3 → XP_027830856.1  nuclear receptor ROR-gamma isoform X5

    UniProtKB/TrEMBL
    A0A0F7YC00

  3. XM_042257092.2 → XP_042113026.1  nuclear receptor ROR-gamma isoform X11

    UniProtKB/TrEMBL
    A0A0F7YC00
    Conserved Domains (2) summary
    cd06939
    Location:173 → 411
    NR_LBD_ROR_like; The ligand binding domain of Retinoid-related orphan receptors, of the nuclear receptor superfamily
    cl02596
    Location:1 → 23
    NR_DBD_like; DNA-binding domain of nuclear receptors is composed of two C4-type zinc fingers

  4. XM_042257006.2 → XP_042112940.1  nuclear receptor ROR-gamma isoform X11

    UniProtKB/TrEMBL
    A0A0F7YC00
    Conserved Domains (2) summary
    cd06939
    Location:173 → 411
    NR_LBD_ROR_like; The ligand binding domain of Retinoid-related orphan receptors, of the nuclear receptor superfamily
    cl02596
    Location:1 → 23
    NR_DBD_like; DNA-binding domain of nuclear receptors is composed of two C4-type zinc fingers

  5. XM_027975087.3 → XP_027830888.1  nuclear receptor ROR-gamma isoform X9

    UniProtKB/TrEMBL
    A0A0F7YC00
    Related
    ENSOARP00020023581.1, ENSOART00020028447.2
    Conserved Domains (2) summary
    cd06939
    Location:247 → 485
    NR_LBD_ROR_like; The ligand binding domain of Retinoid-related orphan receptors, of the nuclear receptor superfamily
    cd06968
    Location:4 → 97
    NR_DBD_ROR; DNA-binding domain of Retinoid-related orphan receptors (RORs) is composed of two C4-type zinc fingers

  6. XM_027975074.3 → XP_027830875.1  nuclear receptor ROR-gamma isoform X7

    UniProtKB/TrEMBL
    A0A0F7YC00
    Related
    ENSOARP00020062821.1, ENSOART00020049151.1
    Conserved Domains (2) summary
    cd06939
    Location:257 → 495
    NR_LBD_ROR_like; The ligand binding domain of Retinoid-related orphan receptors, of the nuclear receptor superfamily
    cd06968
    Location:13 → 107
    NR_DBD_ROR; DNA-binding domain of Retinoid-related orphan receptors (RORs) is composed of two C4-type zinc fingers

  7. XM_060414295.1 → XP_060270278.1  nuclear receptor ROR-gamma isoform X11

    UniProtKB/TrEMBL
    A0A0F7YC00

  8. XM_042256846.2 → XP_042112780.1  nuclear receptor ROR-gamma isoform X10

    UniProtKB/TrEMBL
    A0A0F7YC39
    Conserved Domains (2) summary
    cd06939
    Location:247 → 473
    NR_LBD_ROR_like; The ligand binding domain of Retinoid-related orphan receptors, of the nuclear receptor superfamily
    cd06968
    Location:4 → 97
    NR_DBD_ROR; DNA-binding domain of Retinoid-related orphan receptors (RORs) is composed of two C4-type zinc fingers

  9. XM_042256817.2 → XP_042112751.1  nuclear receptor ROR-gamma isoform X9

    UniProtKB/TrEMBL
    A0A0F7YC00
    Conserved Domains (2) summary
    cd06939
    Location:247 → 485
    NR_LBD_ROR_like; The ligand binding domain of Retinoid-related orphan receptors, of the nuclear receptor superfamily
    cd06968
    Location:4 → 97
    NR_DBD_ROR; DNA-binding domain of Retinoid-related orphan receptors (RORs) is composed of two C4-type zinc fingers

  10. XM_042256954.2 → XP_042112888.1  nuclear receptor ROR-gamma isoform X11

    UniProtKB/TrEMBL
    A0A0F7YC00
    Conserved Domains (2) summary
    cd06939
    Location:173 → 411
    NR_LBD_ROR_like; The ligand binding domain of Retinoid-related orphan receptors, of the nuclear receptor superfamily
    cl02596
    Location:1 → 23
    NR_DBD_like; DNA-binding domain of nuclear receptors is composed of two C4-type zinc fingers

  11. XM_042256880.2 → XP_042112814.1  nuclear receptor ROR-gamma isoform X11

    UniProtKB/TrEMBL
    A0A0F7YC00
    Conserved Domains (2) summary
    cd06939
    Location:173 → 411
    NR_LBD_ROR_like; The ligand binding domain of Retinoid-related orphan receptors, of the nuclear receptor superfamily
    cl02596
    Location:1 → 23
    NR_DBD_like; DNA-binding domain of nuclear receptors is composed of two C4-type zinc fingers

  12. XM_042257139.2 → XP_042113073.1  nuclear receptor ROR-gamma isoform X11

    UniProtKB/TrEMBL
    A0A0F7YC00
    Conserved Domains (2) summary
    cd06939
    Location:173 → 411
    NR_LBD_ROR_like; The ligand binding domain of Retinoid-related orphan receptors, of the nuclear receptor superfamily
    cl02596
    Location:1 → 23
    NR_DBD_like; DNA-binding domain of nuclear receptors is composed of two C4-type zinc fingers

  13. XM_042257061.2 → XP_042112995.1  nuclear receptor ROR-gamma isoform X11

    UniProtKB/TrEMBL
    A0A0F7YC00
    Conserved Domains (2) summary
    cd06939
    Location:173 → 411
    NR_LBD_ROR_like; The ligand binding domain of Retinoid-related orphan receptors, of the nuclear receptor superfamily
    cl02596
    Location:1 → 23
    NR_DBD_like; DNA-binding domain of nuclear receptors is composed of two C4-type zinc fingers

  14. XM_042256833.2 → XP_042112767.1  nuclear receptor ROR-gamma isoform X9

    UniProtKB/TrEMBL
    A0A0F7YC00
    Conserved Domains (2) summary
    cd06939
    Location:247 → 485
    NR_LBD_ROR_like; The ligand binding domain of Retinoid-related orphan receptors, of the nuclear receptor superfamily
    cd06968
    Location:4 → 97
    NR_DBD_ROR; DNA-binding domain of Retinoid-related orphan receptors (RORs) is composed of two C4-type zinc fingers

  15. XM_042256759.2 → XP_042112693.1  nuclear receptor ROR-gamma isoform X7

    UniProtKB/TrEMBL
    A0A0F7YC00
    Conserved Domains (2) summary
    cd06939
    Location:257 → 495
    NR_LBD_ROR_like; The ligand binding domain of Retinoid-related orphan receptors, of the nuclear receptor superfamily
    cd06968
    Location:13 → 107
    NR_DBD_ROR; DNA-binding domain of Retinoid-related orphan receptors (RORs) is composed of two C4-type zinc fingers

  16. XM_060414278.1 → XP_060270261.1  nuclear receptor ROR-gamma isoform X6

    UniProtKB/TrEMBL
    A0A0F7YC39

  17. XM_027975048.3 → XP_027830849.1  nuclear receptor ROR-gamma isoform X4

    UniProtKB/TrEMBL
    A0A0F7YC00
    Related
    ENSOARP00020023518.2, ENSOART00020028376.2

  18. XM_042256576.2 → XP_042112510.1  nuclear receptor ROR-gamma isoform X3

    UniProtKB/TrEMBL
    A0A0F7YC39
    Conserved Domains (2) summary
    cd06939
    Location:300 → 526
    NR_LBD_ROR_like; The ligand binding domain of Retinoid-related orphan receptors, of the nuclear receptor superfamily
    cd06968
    Location:56 → 150
    NR_DBD_ROR; DNA-binding domain of Retinoid-related orphan receptors (RORs) is composed of two C4-type zinc fingers

  19. XM_042256551.2 → XP_042112485.1  nuclear receptor ROR-gamma isoform X1

    UniProtKB/TrEMBL
    A0A0F7YC00
    Conserved Domains (2) summary
    cd06939
    Location:300 → 538
    NR_LBD_ROR_like; The ligand binding domain of Retinoid-related orphan receptors, of the nuclear receptor superfamily
    cd06968
    Location:56 → 150
    NR_DBD_ROR; DNA-binding domain of Retinoid-related orphan receptors (RORs) is composed of two C4-type zinc fingers

  20. XM_042256610.2 → XP_042112544.1  nuclear receptor ROR-gamma isoform X2

    UniProtKB/TrEMBL
    A0A0F7YC00
    Conserved Domains (2) summary
    cd06939
    Location:288 → 526
    NR_LBD_ROR_like; The ligand binding domain of Retinoid-related orphan receptors, of the nuclear receptor superfamily
    cd06968
    Location:44 → 138
    NR_DBD_ROR; DNA-binding domain of Retinoid-related orphan receptors (RORs) is composed of two C4-type zinc fingers
Nucleotide Protein Strain
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