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LIMA1 LIM domain and actin binding 1 [ Ovis aries (sheep) ]

Gene ID: 101118861, updated on 8-Mar-2024

Summary

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Gene symbol
LIMA1
Gene description
LIM domain and actin binding 1
See related
EnsemblRapid:ENSOARG00020023296
Gene type
protein coding
RefSeq status
MODEL
Organism
Ovis aries
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Ovis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 3
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2023_10 current ARS-UI_Ramb_v3.0 (GCF_016772045.2) 3 NC_056056.1 (136059343..136149306)

Chromosome 3 - NC_056056.1Genomic Context describing neighboring genes Neighboring gene disco interacting protein 2 homolog B Neighboring gene small ribosomal subunit protein uS5-like Neighboring gene La ribonucleoprotein 4 Neighboring gene family with sequence similarity 186 member A Neighboring gene cytochrome c oxidase assembly protein COX14 Neighboring gene ceramide synthase 5

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056056.1 Chromosome 3 Reference ARS-UI_Ramb_v3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actin filament bundle assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in actin cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LIM domain and actin-binding protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_016772045.2-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UI_Ramb_v3.0 Primary Assembly

Genomic

  1. NC_056056.1 Reference ARS-UI_Ramb_v3.0 Primary Assembly

    Range
    136059343..136149306
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012174310.5 → XP_012029700.1  LIM domain and actin-binding protein 1 isoform X1

    See identical proteins and their annotated locations for XP_012029700.1

    Conserved Domains (1) summary
    cd09485
    Location:400 → 452
    LIM_Eplin_alpha_beta; The Lim domain of Epithelial Protein Lost in Neoplasm (Eplin)

  2. XM_060412609.1 → XP_060268592.1  LIM domain and actin-binding protein 1 isoform X2

  3. XM_060412611.1 → XP_060268594.1  LIM domain and actin-binding protein 1 isoform X4

    UniProtKB/TrEMBL
    A0A6P3E7N1, W5Q8V2

  4. XM_012174309.3 → XP_012029699.1  LIM domain and actin-binding protein 1 isoform X1

    See identical proteins and their annotated locations for XP_012029699.1

    Conserved Domains (1) summary
    cd09485
    Location:400 → 452
    LIM_Eplin_alpha_beta; The Lim domain of Epithelial Protein Lost in Neoplasm (Eplin)

  5. XM_012174311.3 → XP_012029701.1  LIM domain and actin-binding protein 1 isoform X2

    Related
    ENSOARP00020030074.2, ENSOART00020036376.2
    Conserved Domains (1) summary
    cd09485
    Location:399 → 451
    LIM_Eplin_alpha_beta; The Lim domain of Epithelial Protein Lost in Neoplasm (Eplin)

  6. XM_012174313.3 → XP_012029703.1  LIM domain and actin-binding protein 1 isoform X3

    Conserved Domains (1) summary
    cd09485
    Location:391 → 443
    LIM_Eplin_alpha_beta; The Lim domain of Epithelial Protein Lost in Neoplasm (Eplin)

  7. XM_004006359.4 → XP_004006408.1  LIM domain and actin-binding protein 1 isoform X4

    UniProtKB/TrEMBL
    A0A6P3E7N1, W5Q8V2
    Conserved Domains (1) summary
    cd09485
    Location:390 → 442
    LIM_Eplin_alpha_beta; The Lim domain of Epithelial Protein Lost in Neoplasm (Eplin)

  8. XM_060412612.1 → XP_060268595.1  LIM domain and actin-binding protein 1 isoform X5

    Related
    ENSOARP00020030112.2, ENSOART00020036419.2
Nucleotide Protein Strain
Heading Accession and Version

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