U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

usp4 ubiquitin specific peptidase 4 (proto-oncogene) [ Takifugu rubripes (torafugu) ]

Gene ID: 101079470, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
usp4
Gene description
ubiquitin specific peptidase 4 (proto-oncogene)
See related
Ensembl:ENSTRUG00000005043
Gene type
protein coding
RefSeq status
MODEL
Organism
Takifugu rubripes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Tetraodontiformes; Tetradontoidea; Tetraodontidae; Takifugu
Orthologs
human zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See usp4 in Genome Data Viewer
Location:
chromosome: 19
Exon count:
22
Annotation release Status Assembly Chr Location
103 current fTakRub1.2 (GCF_901000725.2) 19 NC_042303.1 (8092467..8100569)
101 previous assembly FUGU5 (GCF_000180615.1) 19 NC_018908.1 (4808663..4816772)

Chromosome 19 - NC_042303.1Genomic Context describing neighboring genes Neighboring gene sodium-coupled neutral amino acid transporter 3-like Neighboring gene ER membrane protein complex subunit 3 Neighboring gene glutathione peroxidase 1 Neighboring gene FA complementation group D2 Neighboring gene testis expressed 264, ER-phagy receptor a

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cysteine-type deubiquitinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein deubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
ubiquitin carboxyl-terminal hydrolase 4

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Takifugu rubripes Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fTakRub1.2 Primary Assembly

Genomic

  1. NC_042303.1 Reference fTakRub1.2 Primary Assembly

    Range
    8092467..8100569
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011613763.2 → XP_011612065.2  ubiquitin carboxyl-terminal hydrolase 4 isoform X1

    UniProtKB/TrEMBL
    A0A674MA06
    Related
    ENSTRUP00000057782.1, ENSTRUT00000091402.1

  2. XM_003973165.3 → XP_003973214.2  ubiquitin carboxyl-terminal hydrolase 4 isoform X2

    UniProtKB/TrEMBL
    A0A674MA06, H2SI59
    Related
    ENSTRUP00000012091.3, ENSTRUT00000012151.3
    Conserved Domains (1) summary
    COG5560
    Location:31 → 973
    UBP12; Ubiquitin C-terminal hydrolase [Posttranslational modification, protein turnover, chaperones]
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.