U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

llgl1 LLGL scribble cell polarity complex component 1 [ Takifugu rubripes (torafugu) ]

Gene ID: 101077214, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
llgl1
Gene description
LLGL scribble cell polarity complex component 1
See related
Ensembl:ENSTRUG00000017766
Gene type
protein coding
RefSeq status
MODEL
Organism
Takifugu rubripes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Tetraodontiformes; Tetradontoidea; Tetraodontidae; Takifugu
Orthologs
human zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See llgl1 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
24
Annotation release Status Assembly Chr Location
103 current fTakRub1.2 (GCF_901000725.2) 5 NC_042289.1 (4801159..4821808, complement)
101 previous assembly FUGU5 (GCF_000180615.1) Unplaced Scaffold NW_004071242.1 (67199..86732, complement)

Chromosome 5 - NC_042289.1Genomic Context describing neighboring genes Neighboring gene desumoylating isopeptidase 1a Neighboring gene FLII actin remodeling protein Neighboring gene myosin XVAa Neighboring gene gastrula zinc finger protein XlCGF52.1-like

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables myosin II binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cortical actin cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in establishment of spindle orientation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of Notch signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of establishment or maintenance of cell polarity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of protein secretion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cortical actin cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
lethal(2) giant larvae protein homolog 1
Names
LLGL1, scribble cell polarity complex component

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Takifugu rubripes Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fTakRub1.2 Primary Assembly

Genomic

  1. NC_042289.1 Reference fTakRub1.2 Primary Assembly

    Range
    4801159..4821808 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029835997.1 → XP_029691857.1  lethal(2) giant larvae protein homolog 1 isoform X2

    UniProtKB/TrEMBL
    A0A674MXF3
    Related
    ENSTRUP00000045536.3, ENSTRUT00000045690.3
    Conserved Domains (3) summary
    sd00039
    Location:38 → 73
    7WD40; WD40 repeat [structural motif]
    pfam08366
    Location:283 → 383
    LLGL; LLGL2
    cl29593
    Location:38 → 286
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  2. XM_029835996.1 → XP_029691856.1  lethal(2) giant larvae protein homolog 1 isoform X1

    UniProtKB/TrEMBL
    A0A674MXF3, A0A674N1H1
    Related
    ENSTRUP00000067532.1, ENSTRUT00000072379.1
    Conserved Domains (3) summary
    sd00039
    Location:38 → 73
    7WD40; WD40 repeat [structural motif]
    pfam08366
    Location:284 → 384
    LLGL; LLGL2
    cl29593
    Location:38 → 287
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.