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LOC101074513 EF-hand domain-containing protein 1 [ Takifugu rubripes (torafugu) ]

Gene ID: 101074513, updated on 21-Dec-2023

Summary

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Gene symbol
LOC101074513
Gene description
EF-hand domain-containing protein 1
See related
Ensembl:ENSTRUG00000007418
Gene type
protein coding
RefSeq status
MODEL
Organism
Takifugu rubripes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Tetraodontiformes; Tetradontoidea; Tetraodontidae; Takifugu
Also known as
efhc1
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Genomic context

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Location:
chromosome: 16
Exon count:
10
Annotation release Status Assembly Chr Location
103 current fTakRub1.2 (GCF_901000725.2) 16 NC_042300.1 (11645326..11649429, complement)
101 previous assembly FUGU5 (GCF_000180615.1) 16 NC_018905.1 (9252790..9255927, complement)

Chromosome 16 - NC_042300.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC115253043 Neighboring gene PR domain zinc finger protein 1-like Neighboring gene XK related 5a Neighboring gene translocation associated membrane protein 2 Neighboring gene uncharacterized LOC115253014 Neighboring gene EF-hand domain-containing protein 1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-tubulin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cilium-dependent cell motility IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitotic cytokinesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitotic spindle organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in axoneme IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitotic spindle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
EF-hand domain-containing protein 1
Names
EF-hand domain containing 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Takifugu rubripes Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fTakRub1.2 Primary Assembly

Genomic

  1. NC_042300.1 Reference fTakRub1.2 Primary Assembly

    Range
    11645326..11649429 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011612272.2 → XP_011610574.2  EF-hand domain-containing protein 1

    UniProtKB/TrEMBL
    A0A674PID8, H2T0Z6
    Related
    ENSTRUP00000018334.3, ENSTRUT00000018410.3
    Conserved Domains (1) summary
    pfam06565
    Location:86 → 190
    DUF1126; DUF1126 PH-like domain
Nucleotide Protein
Heading Accession and Version

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