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cars1 cysteinyl-tRNA synthetase 1 [ Takifugu rubripes (torafugu) ]

Gene ID: 101074195, updated on 8-Mar-2024

Summary

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Gene symbol
cars1
Gene description
cysteinyl-tRNA synthetase 1
See related
Ensembl:ENSTRUG00000008686
Gene type
protein coding
RefSeq status
MODEL
Organism
Takifugu rubripes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Tetraodontiformes; Tetradontoidea; Tetraodontidae; Takifugu
Also known as
cars
Orthologs
human zebrafish all
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Genomic context

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See cars1 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
23
Annotation release Status Assembly Chr Location
103 current fTakRub1.2 (GCF_901000725.2) 13 NC_042297.1 (11371026..11378776)
101 previous assembly FUGU5 (GCF_000180615.1) 13 NC_018902.1 (7718965..7726720)

Chromosome 13 - NC_042297.1Genomic Context describing neighboring genes Neighboring gene ADP-ribosylation factor GTPase activating protein 2 Neighboring gene peroxisomal biogenesis factor 16 Neighboring gene G2/mitotic-specific cyclin-B2-like Neighboring gene crystallin beta gamma X

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cysteine-tRNA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cysteinyl-tRNA aminoacylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cysteine--tRNA ligase, cytoplasmic

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Takifugu rubripes Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fTakRub1.2 Primary Assembly

Genomic

  1. NC_042297.1 Reference fTakRub1.2 Primary Assembly

    Range
    11371026..11378776
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011609794.2 → XP_011608096.1  cysteine--tRNA ligase, cytoplasmic isoform X2

    UniProtKB/TrEMBL
    A0A674NBK6
    Related
    ENSTRUP00000070601.1, ENSTRUT00000076420.1
    Conserved Domains (1) summary
    PTZ00399
    Location:14 → 740
    PTZ00399; cysteinyl-tRNA-synthetase; Provisional

  2. XM_029845897.1 → XP_029701757.1  cysteine--tRNA ligase, cytoplasmic isoform X1

    UniProtKB/TrEMBL
    H2TAW5
    Related
    ENSTRUP00000021805.3, ENSTRUT00000021893.3
    Conserved Domains (2) summary
    cd10310
    Location:3 → 74
    GST_C_CysRS_N; Glutathione S-transferase C-terminal-like, alpha helical domain of Cysteinyl-tRNA synthetase from higher eukaryotes
    PTZ00399
    Location:82 → 816
    PTZ00399; cysteinyl-tRNA-synthetase; Provisional
Nucleotide Protein
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