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pard6gb par-6 family cell polarity regulator gamma b [ Takifugu rubripes (torafugu) ]

Gene ID: 101073683, updated on 8-Mar-2024

Summary

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Gene symbol
pard6gb
Gene description
par-6 family cell polarity regulator gamma b
See related
Ensembl:ENSTRUG00000022301
Gene type
protein coding
RefSeq status
MODEL
Organism
Takifugu rubripes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Tetraodontiformes; Tetradontoidea; Tetraodontidae; Takifugu
Also known as
pard6g
Orthologs
zebrafish all
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Genomic context

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Location:
chromosome: 12
Exon count:
3
Annotation release Status Assembly Chr Location
103 current fTakRub1.2 (GCF_901000725.2) 12 NC_042296.1 (2340952..2359612)
101 previous assembly FUGU5 (GCF_000180615.1) 12 NC_018901.1 (1938900..1957635)

Chromosome 12 - NC_042296.1Genomic Context describing neighboring genes Neighboring gene dystrobrevin binding protein 1b Neighboring gene jumonji and AT-rich interaction domain containing 2b Neighboring gene biogenesis of lysosomal organelles complex-1, subunit 4, cappuccino Neighboring gene ribonucleotide reductase M2 b

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein kinase C binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in centrosome cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in establishment or maintenance of cell polarity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cellular localization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in apical plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cell cortex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
partitioning defective 6 homolog gamma

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Takifugu rubripes Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fTakRub1.2 Primary Assembly

Genomic

  1. NC_042296.1 Reference fTakRub1.2 Primary Assembly

    Range
    2340952..2359612
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003968842.3 → XP_003968891.1  partitioning defective 6 homolog gamma

    UniProtKB/TrEMBL
    A0A3B5K1J1
    Related
    ENSTRUP00000049210.1, ENSTRUT00000055953.2
    Conserved Domains (2) summary
    cd06403
    Location:19 → 98
    PB1_Par6; The PB1 domain is an essential part of Par6 protein which in complex with Par3 and aPKC proteins is crucial for establishment of apical-basal polarity of animal cells. The PB1 domain is a modular domain mediating specific protein-protein interactions ...
    cd00992
    Location:158 → 249
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
Nucleotide Protein
Heading Accession and Version

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