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scfd2 sec1 family domain containing 2 [ Takifugu rubripes (torafugu) ]

Gene ID: 101073087, updated on 8-Mar-2024

Summary

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Gene symbol
scfd2
Gene description
sec1 family domain containing 2
See related
Ensembl:ENSTRUG00000014970
Gene type
protein coding
RefSeq status
MODEL
Organism
Takifugu rubripes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Tetraodontiformes; Tetradontoidea; Tetraodontidae; Takifugu
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 20
Exon count:
10
Annotation release Status Assembly Chr Location
103 current fTakRub1.2 (GCF_901000725.2) 20 NC_042304.1 (4673149..4732510, complement)
101 previous assembly FUGU5 (GCF_000180615.1) 20 NC_018909.1 (2629581..2688974, complement)

Chromosome 20 - NC_042304.1Genomic Context describing neighboring genes Neighboring gene ubiquitin specific peptidase 46 Neighboring gene RAS-like, family 11, member B Neighboring gene uncharacterized LOC115247193 Neighboring gene ligand of numb-protein X 1 Neighboring gene GS homeobox 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sec1 family domain-containing protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Takifugu rubripes Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fTakRub1.2 Primary Assembly

Genomic

  1. NC_042304.1 Reference fTakRub1.2 Primary Assembly

    Range
    4673149..4732510 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029828013.1 → XP_029683873.1  sec1 family domain-containing protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A674NVS5, A0A674PH33
    Related
    ENSTRUP00000084889.1, ENSTRUT00000089430.1

  2. XM_003973930.3 → XP_003973979.2  sec1 family domain-containing protein 2 isoform X2

    UniProtKB/TrEMBL
    A0A674NVS5, H2UMU3
    Related
    ENSTRUP00000038264.2, ENSTRUT00000038401.3
Nucleotide Protein
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Molecular Biology Databases
Research Materials