U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

smyd2b SET and MYND domain containing 2b [ Takifugu rubripes (torafugu) ]

Gene ID: 101072718, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
smyd2b
Gene description
SET and MYND domain containing 2b
See related
Ensembl:ENSTRUG00000013934
Gene type
protein coding
RefSeq status
MODEL
Organism
Takifugu rubripes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Tetraodontiformes; Tetradontoidea; Tetraodontidae; Takifugu
Orthologs
zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 16
Exon count:
12
Annotation release Status Assembly Chr Location
103 current fTakRub1.2 (GCF_901000725.2) 16 NC_042300.1 (8742391..8746690)
101 previous assembly FUGU5 (GCF_000180615.1) 16 NC_018905.1 (6434086..6439256)

Chromosome 16 - NC_042300.1Genomic Context describing neighboring genes Neighboring gene ribosomal protein S6 kinase polypeptide 1 Neighboring gene prospero homeobox 1a Neighboring gene protein tyrosine phosphatase non-receptor type 14 Neighboring gene pro-opiomelanocortin-like

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
N-lysine methyltransferase SMYD2-B

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Takifugu rubripes Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fTakRub1.2 Primary Assembly

Genomic

  1. NC_042300.1 Reference fTakRub1.2 Primary Assembly

    Range
    8742391..8746690
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003971726.3 → XP_003971775.1  N-lysine methyltransferase SMYD2-B

    UniProtKB/TrEMBL
    A0A674P3L2
    Related
    ENSTRUP00000035638.3, ENSTRUT00000035766.3
    Conserved Domains (3) summary
    pfam13424
    Location:342 → 412
    TPR_12; Tetratricopeptide repeat
    pfam01753
    Location:51 → 89
    zf-MYND; MYND finger
    cl40432
    Location:6 → 266
    SET; SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain superfamily
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials