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trappc9 trafficking protein particle complex 9 [ Takifugu rubripes (torafugu) ]

Gene ID: 101071365, updated on 8-Mar-2024

Summary

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Gene symbol
trappc9
Gene description
trafficking protein particle complex 9
See related
Ensembl:ENSTRUG00000009468
Gene type
protein coding
RefSeq status
MODEL
Organism
Takifugu rubripes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Tetraodontiformes; Tetradontoidea; Tetraodontidae; Takifugu
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 12
Exon count:
24
Annotation release Status Assembly Chr Location
103 current fTakRub1.2 (GCF_901000725.2) 12 NC_042296.1 (6172991..6258591)
101 previous assembly FUGU5 (GCF_000180615.1) 12 NC_018901.1 (5269762..5357757)

Chromosome 12 - NC_042296.1Genomic Context describing neighboring genes Neighboring gene KH domain containing, RNA binding, signal transduction associated 1b Neighboring gene SH3 domain binding glutamate-rich protein like 3 Neighboring gene potassium channel, subfamily K, member 9 Neighboring gene uncharacterized LOC115251752

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in trans-Golgi network IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
trafficking protein particle complex subunit 9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Takifugu rubripes Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fTakRub1.2 Primary Assembly

Genomic

  1. NC_042296.1 Reference fTakRub1.2 Primary Assembly

    Range
    6172991..6258591
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003968994.3 → XP_003969043.1  trafficking protein particle complex subunit 9 isoform X1

    UniProtKB/TrEMBL
    H2TGI5
    Conserved Domains (1) summary
    pfam08626
    Location:70 → 1099
    TRAPPC9-Trs120; Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit

  2. XM_011609005.2 → XP_011607307.1  trafficking protein particle complex subunit 9 isoform X2

    UniProtKB/TrEMBL
    H2TGI5
    Related
    ENSTRUP00000023783.3, ENSTRUT00000023881.3
    Conserved Domains (1) summary
    pfam08626
    Location:70 → 1090
    TRAPPC9-Trs120; Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit

  3. XM_029844823.1 → XP_029700683.1  trafficking protein particle complex subunit 9 isoform X3

    UniProtKB/TrEMBL
    A0A674NEJ5
    Related
    ENSTRUP00000072069.1, ENSTRUT00000080471.1
Nucleotide Protein
Heading Accession and Version

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