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cbll1 Cbl proto-oncogene-like 1, E3 ubiquitin protein ligase [ Takifugu rubripes (torafugu) ]

Gene ID: 101066014, updated on 8-Mar-2024

Summary

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Gene symbol
cbll1
Gene description
Cbl proto-oncogene-like 1, E3 ubiquitin protein ligase
See related
Ensembl:ENSTRUG00000006822
Gene type
protein coding
RefSeq status
MODEL
Organism
Takifugu rubripes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Tetraodontiformes; Tetradontoidea; Tetraodontidae; Takifugu
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 18
Exon count:
7
Annotation release Status Assembly Chr Location
103 current fTakRub1.2 (GCF_901000725.2) 18 NC_042302.1 (1119505..1124970)
101 previous assembly FUGU5 (GCF_000180615.1) Unplaced Scaffold NW_004072462.1 (92439..98634, complement)

Chromosome 18 - NC_042302.1Genomic Context describing neighboring genes Neighboring gene adrenomedullin 2a Neighboring gene SET binding factor 1 Neighboring gene protein phosphatase 6, regulatory subunit 2a Neighboring gene chloride anion exchanger-like Neighboring gene solute carrier family 26 member 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein ubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
E3 ubiquitin-protein ligase Hakai
Names
Cbl proto-oncogene like 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Takifugu rubripes Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fTakRub1.2 Primary Assembly

Genomic

  1. NC_042302.1 Reference fTakRub1.2 Primary Assembly

    Range
    1119505..1124970
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003978515.3 → XP_003978564.3  E3 ubiquitin-protein ligase Hakai isoform X2

    Conserved Domains (3) summary
    cd16508
    Location:118 → 158
    RING-HC_HAKAI_like; RING finger, HC subclass, found in E3 ubiquitin-protein ligase Hakai, zinc finger protein 645 (ZNF645), and similar proteins
    pfam09770
    Location:320 → 451
    PAT1; Topoisomerase II-associated protein PAT1
    pfam18408
    Location:177 → 208
    zf_Hakai; C2H2 Hakai zinc finger domain

  2. XM_029825653.1 → XP_029681513.1  E3 ubiquitin-protein ligase Hakai isoform X1

    UniProtKB/TrEMBL
    H2SWG7
    Related
    ENSTRUP00000016755.3, ENSTRUT00000016828.3
    Conserved Domains (3) summary
    cd16508
    Location:183 → 223
    RING-HC_HAKAI_like; RING finger, HC subclass, found in E3 ubiquitin-protein ligase Hakai, zinc finger protein 645 (ZNF645), and similar proteins
    pfam09770
    Location:385 → 516
    PAT1; Topoisomerase II-associated protein PAT1
    pfam18408
    Location:242 → 273
    zf_Hakai; C2H2 Hakai zinc finger domain
Nucleotide Protein
Heading Accession and Version

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