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FARP2 FERM, ARH/RhoGEF and pleckstrin domain protein 2 [ Saimiri boliviensis (Bolivian squirrel monkey) ]

Gene ID: 101033201, updated on 8-Mar-2024

Summary

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Gene symbol
FARP2
Gene description
FERM, ARH/RhoGEF and pleckstrin domain protein 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Saimiri boliviensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Saimiriinae; Saimiri
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
27
Annotation release Status Assembly Chr Location
102 current BCM_Sbol_2.0 (GCF_016699345.1) Unplaced Scaffold NW_024100922.1 (102730048..102874427)

NW_024100922.1Genomic Context describing neighboring genes Neighboring gene high density lipoprotein binding protein Neighboring gene septin 2 Neighboring gene serine/threonine-protein kinase 25 Neighboring gene serine/threonine-protein kinase 25 Neighboring gene FERM, ARHGEF and pleckstrin domain-containing protein 2-like Neighboring gene BCL2 family apoptosis regulator BOK

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024100922 Unplaced Scaffold Reference BCM_Sbol_2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cytoskeletal protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables guanyl-nucleotide exchange factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: FERM, ARHGEF and pleckstrin domain-containing protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Saimiri boliviensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BCM_Sbol_2.0 Primary Assembly

Genomic

  1. NW_024100922.1 Reference BCM_Sbol_2.0 Primary Assembly

    Range
    102730048..102874427
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039469883.1 → XP_039325817.1  LOW QUALITY PROTEIN: FERM, ARHGEF and pleckstrin domain-containing protein 2

    UniProtKB/TrEMBL
    A0A2K6UYX3
    Conserved Domains (7) summary
    smart00295
    Location:45 → 234
    B41; Band 4.1 homologues
    COG3456
    Location:384 → 550
    COG3456; Predicted component of the type VI protein secretion system, contains a FHA domain [Signal transduction mechanisms, Intracellular trafficking, secretion, and vesicular transport]
    cd00160
    Location:535 → 718
    RhoGEF; Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases; Also called Dbl-homologous (DH) domain. It appears that PH domains invariably occur C-terminal to RhoGEF/DH domains.
    cd01220
    Location:747 → 853
    PH1_FARP1-like; FERM, RhoGEF and pleckstrin domain-containing protein 1 and related proteins Pleckstrin Homology (PH) domain, repeat 1
    cd13193
    Location:221 → 341
    FERM_C_FARP1-like; FERM domain C-lobe of FERM, RhoGEF and pleckstrin domain-containing protein 1 and related proteins
    cd13235
    Location:926 → 1023
    PH2_FARP1-like; FERM, RhoGEF and pleckstrin domain-containing protein 1 and related proteins Pleckstrin Homology (PH) domain, repeat 2
    pfam08736
    Location:333 → 375
    FA; FERM adjacent (FA)
Nucleotide Protein
Heading Accession and Version

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