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SNX21 sorting nexin family member 21 [ Saimiri boliviensis (Bolivian squirrel monkey) ]

Gene ID: 101031403, updated on 8-Mar-2024

Summary

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Gene symbol
SNX21
Gene description
sorting nexin family member 21
See related
EnsemblRapid:ENSSBOG00000003942
Gene type
protein coding
RefSeq status
MODEL
Organism
Saimiri boliviensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Saimiriinae; Saimiri
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
102 current BCM_Sbol_2.0 (GCF_016699345.1) Unplaced Scaffold NW_024100935.1 (37919093..37927210)

NW_024100935.1Genomic Context describing neighboring genes Neighboring gene ubiquitin conjugating enzyme E2 C Neighboring gene troponin C2, fast skeletal type Neighboring gene acyl-CoA thioesterase 8 Neighboring gene zinc finger SWIM-type containing 3 Neighboring gene zinc finger SWIM-type containing 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024100935 Unplaced Scaffold Reference BCM_Sbol_2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in early endosome membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sorting nexin-21

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Saimiri boliviensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BCM_Sbol_2.0 Primary Assembly

Genomic

  1. NW_024100935.1 Reference BCM_Sbol_2.0 Primary Assembly

    Range
    37919093..37927210
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010346918.2 → XP_010345220.1  sorting nexin-21 isoform X2

    UniProtKB/TrEMBL
    A0A2K6S0L4, A0A2K6S0M2
    Related
    ENSSBOP00000000923.1, ENSSBOT00000004551.2
    Conserved Domains (1) summary
    cl02563
    Location:132 → 150
    PX_domain; The Phox Homology domain, a phosphoinositide binding module

  2. XM_003936455.3 → XP_003936504.2  sorting nexin-21 isoform X1

    UniProtKB/TrEMBL
    A0A2K6S0K7
    Related
    ENSSBOP00000048241.1, ENSSBOT00000069942.1
    Conserved Domains (2) summary
    sd00006
    Location:245 → 269
    TPR; TPR repeat [structural motif]
    cl02563
    Location:132 → 243
    PX_domain; The Phox Homology domain, a phosphoinositide binding module

  3. XM_010346919.2 → XP_010345221.1  sorting nexin-21 isoform X3

    UniProtKB/TrEMBL
    A0A2K6S0M2
Nucleotide Protein
Heading Accession and Version

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