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SYNPO2L synaptopodin 2 like [ Papio anubis (olive baboon) ]

Gene ID: 101022706, updated on 8-Mar-2024

Summary

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Gene symbol
SYNPO2L
Gene description
synaptopodin 2 like
See related
Ensembl:ENSPANG00000034850
Gene type
protein coding
RefSeq status
MODEL
Organism
Papio anubis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Papio
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 11
Exon count:
6
Annotation release Status Assembly Chr Location
104 current Panubis1.0 (GCF_008728515.1) 11 NC_044986.1 (70197110..70216028, complement)
103 previous assembly Panu_3.0 (GCF_000264685.3) 9 NC_018160.2 (56279614..56298954)

Chromosome 11 - NC_044986.1Genomic Context describing neighboring genes Neighboring gene ubiquitin specific peptidase 54 Neighboring gene U6 spliceosomal RNA Neighboring gene myozenin 1 Neighboring gene SEC24 homolog C, COPII coat complex component Neighboring gene uncharacterized LOC108587607 Neighboring gene fucosyltransferase 11

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of actin filament bundle assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Z disc IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in actin cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
synaptopodin 2-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Papio anubis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Panubis1.0 Primary Assembly

Genomic

  1. NC_044986.1 Reference Panubis1.0 Primary Assembly

    Range
    70197110..70216028 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009214666.2 → XP_009212930.1  synaptopodin 2-like protein isoform X2

    Conserved Domains (2) summary
    PHA03247
    Location:338 → 553
    PHA03247; large tegument protein UL36; Provisional
    PRK10263
    Location:23 → 452
    PRK10263; DNA translocase FtsK; Provisional

  2. XM_003903762.5 → XP_003903811.1  synaptopodin 2-like protein isoform X1

    UniProtKB/TrEMBL
    A0A2I3NI79
    Related
    ENSPANP00000047546.1, ENSPANT00000046259.2
    Conserved Domains (1) summary
    cd00992
    Location:6 → 85
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...

  3. XM_009214667.4 → XP_009212931.1  synaptopodin 2-like protein isoform X3

    Conserved Domains (1) summary
    PHA03247
    Location:183 → 398
    PHA03247; large tegument protein UL36; Provisional
Nucleotide Protein
Heading Accession and Version

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