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VPS13B vacuolar protein sorting 13 homolog B [ Papio anubis (olive baboon) ]

Gene ID: 101015141, updated on 8-Mar-2024

Summary

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Gene symbol
VPS13B
Gene description
vacuolar protein sorting 13 homolog B
See related
Ensembl:ENSPANG00000007131
Gene type
protein coding
RefSeq status
MODEL
Organism
Papio anubis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Papio
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 8
Exon count:
61
Annotation release Status Assembly Chr Location
104 current Panubis1.0 (GCF_008728515.1) 8 NC_044983.1 (94400498..95277292)
103 previous assembly Panu_3.0 (GCF_000264685.3) 8 NC_018159.2 (94766499..95608001)

Chromosome 8 - NC_044983.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC103886998 Neighboring gene ubiquitin-conjugating enzyme E2 variant 1 pseudogene Neighboring gene insulin-like growth factor 2 mRNA-binding protein 2 pseudogene Neighboring gene uncharacterized LOC116268678 Neighboring gene mitochondrial proton/calcium exchanger protein pseudogene Neighboring gene 28S ribosomal protein S22, mitochondrial pseudogene Neighboring gene cytochrome c oxidase subunit 6C Neighboring gene EF-hand calcium-binding domain-containing protein 14 pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

General protein information

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Preferred Names
vacuolar protein sorting-associated protein 13B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Papio anubis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Panubis1.0 Primary Assembly

Genomic

  1. NC_044983.1 Reference Panubis1.0 Primary Assembly

    Range
    94400498..95277292
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031669315.1 → XP_031525175.1  vacuolar protein sorting-associated protein 13B

    UniProtKB/TrEMBL
    A0A096NDW3
    Related
    ENSPANP00000011063.3, ENSPANT00000009072.3
    Conserved Domains (4) summary
    pfam06650
    Location:2580 → 2772
    SHR-BD; SHR-binding domain of vacuolar-sorting associated protein 13
    pfam09333
    Location:3681 → 3785
    ATG_C; Autophagy-related protein C terminal domain
    pfam12624
    Location:3 → 94
    Chorein_N; N-terminal region of Chorein or VPS13
    pfam16909
    Location:3533 → 3679
    VPS13_C; Vacuolar-sorting-associated 13 protein C-terminal
Nucleotide Protein
Heading Accession and Version

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