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HLCS holocarboxylase synthetase [ Papio anubis (olive baboon) ]

Gene ID: 101013764, updated on 18-Sep-2024

Summary

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Gene symbol
HLCS
Gene description
holocarboxylase synthetase
See related
Ensembl:ENSPANG00000011262
Gene type
protein coding
RefSeq status
MODEL
Organism
Papio anubis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Papio
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 4
Exon count:
16
Annotation release Status Assembly Chr Location
104 current Panubis1.0 (GCF_008728515.1) 4 NC_044979.1 (172226393..172472254, complement)
103 previous assembly Panu_3.0 (GCF_000264685.3) 3 NC_018154.2 (9596580..9846332)

Chromosome 4 - NC_044979.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC108584890 Neighboring gene SIM bHLH transcription factor 2 Neighboring gene uncharacterized LOC103882603 Neighboring gene protein ripply3-like Neighboring gene 39S ribosomal protein L20, mitochondrial pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables biotin--[biotin carboxyl-carrier protein] ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein modification process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
biotin--protein ligase
Names
holocarboxylase synthetase (biotin-(proprionyl-CoA-carboxylase (ATP-hydrolysing)) ligase)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Papio anubis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Panubis1.0 Primary Assembly

Genomic

  1. NC_044979.1 Reference Panubis1.0 Primary Assembly

    Range
    172226393..172472254 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021935523.2 → XP_021791215.2  biotin--protein ligase isoform X4

    UniProtKB/TrEMBL
    A0A096NJ46
    Conserved Domains (3) summary
    cd16442
    Location:467 → 658
    BPL; biotin protein ligase
    pfam02237
    Location:680 → 727
    BPL_C; Biotin protein ligase C terminal domain
    cl00020
    Location:202 → 460
    GAT_1; Type 1 glutamine amidotransferase (GATase1)-like domain

  2. XM_021935526.2 → XP_021791218.2  biotin--protein ligase isoform X4

    UniProtKB/TrEMBL
    A0A096NJ46
    Conserved Domains (3) summary
    cd16442
    Location:467 → 658
    BPL; biotin protein ligase
    pfam02237
    Location:680 → 727
    BPL_C; Biotin protein ligase C terminal domain
    cl00020
    Location:202 → 460
    GAT_1; Type 1 glutamine amidotransferase (GATase1)-like domain

  3. XM_021935525.2 → XP_021791217.2  biotin--protein ligase isoform X4

    UniProtKB/TrEMBL
    A0A096NJ46
    Conserved Domains (3) summary
    cd16442
    Location:467 → 658
    BPL; biotin protein ligase
    pfam02237
    Location:680 → 727
    BPL_C; Biotin protein ligase C terminal domain
    cl00020
    Location:202 → 460
    GAT_1; Type 1 glutamine amidotransferase (GATase1)-like domain

  4. XM_021935522.2 → XP_021791214.2  biotin--protein ligase isoform X2

    UniProtKB/TrEMBL
    A0A8I5NLQ6
    Conserved Domains (3) summary
    cd16442
    Location:614 → 805
    BPL; biotin protein ligase
    pfam02237
    Location:827 → 874
    BPL_C; Biotin protein ligase C terminal domain
    cl00020
    Location:349 → 607
    GAT_1; Type 1 glutamine amidotransferase (GATase1)-like domain

  5. XM_017956451.3 → XP_017811940.2  biotin--protein ligase isoform X3

    UniProtKB/TrEMBL
    A0A2I3MHE5, A0A8I5NLQ6
    Related
    ENSPANP00000035126.2, ENSPANT00000037193.2
    Conserved Domains (3) summary
    cd16442
    Location:615 → 795
    BPL; biotin protein ligase
    pfam02237
    Location:817 → 864
    BPL_C; Biotin protein ligase C terminal domain
    cl00020
    Location:350 → 608
    GAT_1; Type 1 glutamine amidotransferase (GATase1)-like domain

  6. XM_021935521.2 → XP_021791213.2  biotin--protein ligase isoform X1

    UniProtKB/TrEMBL
    A0A8I5NLQ6
    Conserved Domains (3) summary
    cd16442
    Location:615 → 806
    BPL; biotin protein ligase
    pfam02237
    Location:828 → 875
    BPL_C; Biotin protein ligase C terminal domain
    cl00020
    Location:350 → 608
    GAT_1; Type 1 glutamine amidotransferase (GATase1)-like domain

  7. XM_021935524.2 → XP_021791216.2  biotin--protein ligase isoform X4

    UniProtKB/TrEMBL
    A0A096NJ46
    Conserved Domains (3) summary
    cd16442
    Location:467 → 658
    BPL; biotin protein ligase
    pfam02237
    Location:680 → 727
    BPL_C; Biotin protein ligase C terminal domain
    cl00020
    Location:202 → 460
    GAT_1; Type 1 glutamine amidotransferase (GATase1)-like domain

  8. XM_031665734.1 → XP_031521594.1  biotin--protein ligase isoform X4

    UniProtKB/TrEMBL
    A0A096NJ46
    Related
    ENSPANP00000012995.2, ENSPANT00000012099.3
    Conserved Domains (3) summary
    cd16442
    Location:467 → 658
    BPL; biotin protein ligase
    pfam02237
    Location:680 → 727
    BPL_C; Biotin protein ligase C terminal domain
    cl00020
    Location:202 → 460
    GAT_1; Type 1 glutamine amidotransferase (GATase1)-like domain
Nucleotide Protein
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