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EEPD1 endonuclease/exonuclease/phosphatase family domain containing 1 [ Pan paniscus (pygmy chimpanzee) ]

Gene ID: 100992632, updated on 8-Mar-2024

Summary

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Gene symbol
EEPD1
Gene description
endonuclease/exonuclease/phosphatase family domain containing 1
See related
Ensembl:ENSPPAG00000040112
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan paniscus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 6
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanPan1-v2.0_pri (GCF_029289425.2) 6 NC_073255.2 (40977504..41120149)
RS_2023_05 previous assembly NHGRI_mPanPan1-v1.1-0.1.freeze_pri (GCF_029289425.1) 7 NC_073256.1 (89302238..89444888)

Chromosome 6 - NC_073255.2Genomic Context describing neighboring genes Neighboring gene septin-7-like Neighboring gene protein phosphatase 1 regulatory subunit 14B-like Neighboring gene uncharacterized LOC130541652 Neighboring gene microtubule associated tyrosine carboxypeptidase 2 Neighboring gene anillin, actin binding protein Neighboring gene uncharacterized LOC129398413 Neighboring gene acyloxyacyl hydrolase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables catalytic activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
endonuclease/exonuclease/phosphatase family domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029289425.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

Genomic

  1. NC_073255.2 Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

    Range
    40977504..41120149
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003814964.7 → XP_003815012.1  endonuclease/exonuclease/phosphatase family domain-containing protein 1 isoform X1

    See identical proteins and their annotated locations for XP_003815012.1

    UniProtKB/TrEMBL
    A0A2R9BXX1
    Related
    ENSPPAP00000034527.1
    Conserved Domains (2) summary
    cd10283
    Location:261 → 538
    MnuA_DNase1-like; Mycoplasma pulmonis MnuA nuclease-like
    pfam12836
    Location:35 → 95
    HHH_3; Helix-hairpin-helix motif

  2. XM_034963937.3 → XP_034819828.1  endonuclease/exonuclease/phosphatase family domain-containing protein 1 isoform X2

    Conserved Domains (2) summary
    pfam12836
    Location:35 → 95
    HHH_3; Helix-hairpin-helix motif
    cl00490
    Location:261 → 456
    EEP; Exonuclease-Endonuclease-Phosphatase (EEP) domain superfamily
Nucleotide Protein
Heading Accession and Version

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