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LRMDA leucine rich melanocyte differentiation associated [ Pan paniscus (pygmy chimpanzee) ]

Gene ID: 100992390, updated on 6-Jun-2024

Summary

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Gene symbol
LRMDA
Gene description
leucine rich melanocyte differentiation associated
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan paniscus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Also known as
C10H10orf11
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 8
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanPan1-v2.0_pri (GCF_029289425.2) 8 NC_073257.2 (87574802..88712386)
RS_2023_05 previous assembly NHGRI_mPanPan1-v1.1-0.1.freeze_pri (GCF_029289425.1) 10 NC_073259.1 (87591299..88715871)

Chromosome 8 - NC_073257.2Genomic Context describing neighboring genes Neighboring gene sperm surface protein Sp17-like Neighboring gene zinc finger protein 503 Neighboring gene uncharacterized LOC134731105 Neighboring gene U6 spliceosomal RNA Neighboring gene ATP synthase F(0) complex subunit C1, mitochondrial-like Neighboring gene potassium calcium-activated channel subfamily M alpha 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in melanocyte differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
leucine-rich melanocyte differentiation-associated protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029289425.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

Genomic

  1. NC_073257.2 Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

    Range
    87574802..88712386
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063607438.1 → XP_063463508.1  leucine-rich melanocyte differentiation-associated protein isoform X1

    UniProtKB/TrEMBL
    A0A2R9AP76

  2. XM_063607439.1 → XP_063463509.1  leucine-rich melanocyte differentiation-associated protein isoform X2

    UniProtKB/TrEMBL
    A0A2R9AP76

  3. XM_034930898.3 → XP_034786789.1  leucine-rich melanocyte differentiation-associated protein isoform X3

    UniProtKB/TrEMBL
    A0A2R9AP76
    Conserved Domains (2) summary
    sd00031
    Location:34 → 54
    LRR_1; leucine-rich repeat [structural motif]
    pfam14580
    Location:36 → 159
    LRR_9; Leucine-rich repeat
Nucleotide Protein
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