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ABCD3 ATP binding cassette subfamily D member 3 [ Pan paniscus (pygmy chimpanzee) ]

Gene ID: 100987965, updated on 11-Apr-2024

Summary

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Gene symbol
ABCD3
Gene description
ATP binding cassette subfamily D member 3
See related
Ensembl:ENSPPAG00000039827
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan paniscus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
23
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanPan1-v2.0_pri (GCF_029289425.2) 1 NC_073249.2 (132505970..132606599, complement)
RS_2023_05 previous assembly NHGRI_mPanPan1-v1.1-0.1.freeze_pri (GCF_029289425.1) 1 NC_073249.1 (131660847..131761306, complement)

Chromosome 1 - NC_073249.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC103784411 Neighboring gene coagulation factor III, tissue factor Neighboring gene glyceraldehyde-3-phosphate dehydrogenase-like Neighboring gene Rho GTPase activating protein 29 Neighboring gene small nucleolar RNA U13

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ABC-type transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables long-chain fatty acid transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid beta-oxidation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in long-chain fatty acid import into peroxisome IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in peroxisome organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in very long-chain fatty acid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in peroxisomal membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in peroxisome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ATP-binding cassette sub-family D member 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029289425.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

Genomic

  1. NC_073249.2 Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

    Range
    132505970..132606599 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003808440.6 → XP_003808488.1  ATP-binding cassette sub-family D member 3 isoform X1

    See identical proteins and their annotated locations for XP_003808488.1

    UniProtKB/TrEMBL
    A0A2R9BW79, A0A2R9BWX5
    Related
    ENSPPAP00000033942.1
    Conserved Domains (1) summary
    TIGR00954
    Location:1 → 647
    3a01203; Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protein

  2. XM_003808442.7 → XP_003808490.1  ATP-binding cassette sub-family D member 3 isoform X2

    See identical proteins and their annotated locations for XP_003808490.1

    UniProtKB/TrEMBL
    A0A2R9BWX5
    Conserved Domains (1) summary
    TIGR00954
    Location:1 → 574
    3a01203; Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protein
Nucleotide Protein
Heading Accession and Version

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