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L3MBTL4 L3MBTL histone methyl-lysine binding protein 4 [ Pan paniscus (pygmy chimpanzee) ]

Gene ID: 100987111, updated on 6-Jun-2024

Summary

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Gene symbol
L3MBTL4
Gene description
L3MBTL histone methyl-lysine binding protein 4
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan paniscus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 17
Exon count:
21
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanPan1-v2.0_pri (GCF_029289425.2) 17 NC_073266.2 (32028188..32504434)
RS_2023_05 previous assembly NHGRI_mPanPan1-v1.1-0.1.freeze_pri (GCF_029289425.1) 18 NC_073267.1 (17720786..18197249)

Chromosome 17 - NC_073266.2Genomic Context describing neighboring genes Neighboring gene putative uncharacterized protein encoded by LINC01387 Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC117976770 Neighboring gene U5 spliceosomal RNA Neighboring gene uncharacterized LOC134729221 Neighboring gene transmembrane protein 200C

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chromatin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables histone binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lethal(3)malignant brain tumor-like protein 4
Names
L3MBTL4, histone methyl-lysine binding protein
l(3)mbt-like 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029289425.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

Genomic

  1. NC_073266.2 Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

    Range
    32028188..32504434
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_055102573.2 → XP_054958548.1  lethal(3)malignant brain tumor-like protein 4 isoform X6

    UniProtKB/TrEMBL
    A0A2R8ZMY4

  2. XM_034943563.3 → XP_034799454.1  lethal(3)malignant brain tumor-like protein 4 isoform X1

    Conserved Domains (3) summary
    cd09582
    Location:540 → 605
    SAM_Scm-like-3MBT3,4; SAM domain of Scm-like-3MBT3,4 proteins of Polycomb group
    smart00561
    Location:273 → 364
    MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2
    pfam01530
    Location:379 → 407
    zf-C2HC; Zinc finger, C2HC type

  3. XM_055102572.2 → XP_054958547.1  lethal(3)malignant brain tumor-like protein 4 isoform X3

    UniProtKB/TrEMBL
    A0A2R8ZMY4

  4. XM_034943565.3 → XP_034799456.1  lethal(3)malignant brain tumor-like protein 4 isoform X2

    Conserved Domains (3) summary
    cd09582
    Location:531 → 596
    SAM_Scm-like-3MBT3,4; SAM domain of Scm-like-3MBT3,4 proteins of Polycomb group
    smart00561
    Location:273 → 364
    MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2
    pfam01530
    Location:379 → 407
    zf-C2HC; Zinc finger, C2HC type

  5. XM_063597295.1 → XP_063453365.1  lethal(3)malignant brain tumor-like protein 4 isoform X5

  6. XM_063597294.1 → XP_063453364.1  lethal(3)malignant brain tumor-like protein 4 isoform X4

RNA

  1. XR_004667534.3 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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